Infogenomics : The Informational Analysis of Genomes / / Vincenzo Manca and Vincenzo Bonnici

• Autore: Manca Vincenzo
• Pubblicazione: Cham, Switzerland : , : Springer, , [2023]; ©2023
• Edizione: First edition.
• Descrizione fisica: 1 online resource (295 pages)
• Disciplina: 572.86
• Soggetto topico: Genomes; Genomics
• Persona (resp. second.): BonniciVincenzo
• Nota di bibliografia: Includes bibliographical references and index.
• Nota di contenuto: Intro -- Preface -- Contents -- Acronyms -- 1 The Infogenomics Perspective -- References -- 2 Basic Concepts -- 2.1 Sets and Relations -- 2.2 Strings and Rewriting -- 2.3 Variables and Distributions -- 2.4 Events and Probability -- References -- 3 Information Theory -- 3.1 From Physical to Informational Entropy -- 3.2 Entropy and Computation -- 3.3 Entropic Concepts -- 3.4 Codes -- 3.5 Huffman Encoding -- 3.6 First Shannon Theorem -- 3.7 Typical Sequences -- 3.7.1 AEP (Asymptotic Equipartition Property) Theorem -- 3.8 Second Shannon Theorem -- 3.9 Signals and Continuous Distributions -- 3.9.1 Fourier Series -- 3.10 Fourier Transform -- 3.11 Sampling Theorem -- 3.12 Third Shannon Theorem -- References -- 4 Informational Genomics -- 4.1 DNA Structure -- 4.2 Genome Texts -- 4.3 Genome Dictionaries -- 4.4 Genome Informational Indexes -- 4.5 Genome Information Sources -- 4.6 Genome Spectra -- 4.7 Elongation and Segmentation -- 4.8 Genome Informational Laws -- 4.9 Genome Complexity -- 4.10 Genome Divergences and Similarities -- 4.11 Lexicographic Ordering -- 4.12 Suffix Arrays -- References -- 5 Information and Randomness -- 5.1 Topics in Probability Theory -- 5.2 Informational Randomness -- 5.3 Information in Physics -- 5.4 The Informational Nature of Quantum Mechanics -- References -- 6 Life Intelligence -- 6.1 Genetic Algorithms -- 6.2 Swarm Intelligence -- 6.3 Artificial Neural Networks -- 6.4 Artificial Versus Human Intelligence -- References -- 7 Introduction to Python -- 7.1 The Python Language -- 7.2 The Python Environment -- 7.3 Operators -- 7.4 Statements -- 7.5 Functions -- 7.6 Collections -- 7.7 Sorting -- 7.8 Classes and Objects -- 7.9 Methods -- 7.10 Some Notes on Efficiency -- 7.11 Iterators -- 7.12 Itertools -- 8 Laboratory in Python -- 8.1 Extraction of Symbols -- 8.2 Extraction of Words -- 8.3 Word Multiplicity -- 8.4 Counting Words. ; 8.5 Searching for Nullomers -- 8.6 Dictionary Coverage -- 8.7 Reading FASTA Files -- 8.8 Informational Indexes -- 8.9 Genomic Distributions -- 8.10 Genomic Data Structures -- 8.11 Recurrence Patterns -- 8.12 Generation of Random Genomes -- References -- -- Index.
• Titolo autorizzato: Infogenomics
• ISBN: 3-031-44501-5
• Formato: Materiale a stampa
• Livello bibliografico: Monografia
• Lingua di pubblicazione: Inglese
• Record Nr.: 9910765493403321
• Lo trovi qui: Univ. Federico II
• Serie: Emergence, complexity and computation ; ; Volume 48.