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Aquaculture and fisheries biotechnology [[electronic resource] ] : genetic approaches / / Rex A. Dunham
Aquaculture and fisheries biotechnology [[electronic resource] ] : genetic approaches / / Rex A. Dunham
Autore Dunham Rex A
Pubbl/distr/stampa Wallingford, Oxon ; ; New York, : CABI Pub., 2004
Descrizione fisica 1 online resource (384 p.)
Disciplina 639.3
Soggetto topico Fishes - Breeding
Shellfish - Breeding
Fishes - Molecular genetics
Shellfish - Molecular genetics
Soggetto genere / forma Electronic books.
ISBN 1-280-82982-6
9786610829828
0-85199-953-0
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Preface; Acknowledgements; 1 History of Genetic Biotechnology in Aquaculture and Fisheries; 2 Phenotypic Variation and Environmental Effects; 3 Polyploidy; 4 Gynogenesis, Androgenesis, Cloned Populations and Nuclear Transplantation; 5 Sex Reversal and Breeding; 6 Biochemical and Molecular Markers; 7 Population Genetics and Interactions of Hatchery and Wild Fish; 8 Gene Mapping, Quantitative Trait Locus Mapping and Marker-assisted Selection; 9 Gene Expression, Isolation and Cloning; 10 Gene-transfer Technology; 11 Combining Genetic Enhancement Programmes; 12 Genotype-Environment Interactions
13 Environmental Risk of Aquatic Organisms from Genetic Biotechnology14 Food Safety of Transgenic Aquatic Organisms; 15 A Case Example: Safety of Consumption of Transgenic Salmon Potentially Containing Elevated Levels of Growth Hormone and Insulin-like Growth Factor; 16 Government Regulation of Transgenic Fish; 17 Commercial Application of Fish Biotechnology; 18 Strategies for Genetic Conservation, Gene Banking and Maintaining Genetic Quality; 19 Constraints and Limitations of Genetic Biotechnology; Glossary; References and Further Reading; Index
Record Nr. UNINA-9910450058303321
Dunham Rex A  
Wallingford, Oxon ; ; New York, : CABI Pub., 2004
Materiale a stampa
Lo trovi qui: Univ. Federico II
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Aquaculture and fisheries biotechnology : genetic approaches / / Rex A. Dunham [[electronic resource]]
Aquaculture and fisheries biotechnology : genetic approaches / / Rex A. Dunham [[electronic resource]]
Autore Dunham Rex A.
Pubbl/distr/stampa Wallingford, Oxon, United Kingdom, : CABI Pub., 2004
Descrizione fisica 1 online resource : illustrations
Soggetto topico Fishes - Breeding
Shellfish - Breeding
Fishes - Molecular genetics
Shellfish - Molecular genetics
ISBN 9780851999531 (electronic book)
9786610829828
0-85199-953-0
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Preface; Acknowledgements; 1 History of Genetic Biotechnology in Aquaculture and Fisheries; 2 Phenotypic Variation and Environmental Effects; 3 Polyploidy; 4 Gynogenesis, Androgenesis, Cloned Populations and Nuclear Transplantation; 5 Sex Reversal and Breeding; 6 Biochemical and Molecular Markers; 7 Population Genetics and Interactions of Hatchery and Wild Fish; 8 Gene Mapping, Quantitative Trait Locus Mapping and Marker-assisted Selection; 9 Gene Expression, Isolation and Cloning; 10 Gene-transfer Technology; 11 Combining Genetic Enhancement Programmes; 12 Genotype-Environment Interactions
13 Environmental Risk of Aquatic Organisms from Genetic Biotechnology14 Food Safety of Transgenic Aquatic Organisms; 15 A Case Example: Safety of Consumption of Transgenic Salmon Potentially Containing Elevated Levels of Growth Hormone and Insulin-like Growth Factor; 16 Government Regulation of Transgenic Fish; 17 Commercial Application of Fish Biotechnology; 18 Strategies for Genetic Conservation, Gene Banking and Maintaining Genetic Quality; 19 Constraints and Limitations of Genetic Biotechnology; Glossary; References and Further Reading; Index
Record Nr. UNINA-9910783107603321
Dunham Rex A.  
Wallingford, Oxon, United Kingdom, : CABI Pub., 2004
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Functional genomics in aquaculture [[electronic resource] /] / edited by Marco Saroglia and Zhanjiang (John) Liu
Functional genomics in aquaculture [[electronic resource] /] / edited by Marco Saroglia and Zhanjiang (John) Liu
Pubbl/distr/stampa Ames, Iowa, : Wiley-Blackwell, : World Aquaculture Society, 2012
Descrizione fisica 1 online resource (434 p.)
Disciplina 639.2
Altri autori (Persone) SarogliaMarco
LiuZhanjiang
Collana World Aquaculture Society Book series
Soggetto topico Fishes - Breeding
Shellfish - Breeding
Genomics
Aquaculture
ISBN 1-280-68468-2
9786613661623
1-118-35001-4
1-118-35004-9
1-118-35002-2
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Functional Genomics in Aquaculture; Contents; List of Contributors; Preface; Chapter 1 Functional Genomics Research in Aquaculture: Principles and General Approaches; Introduction; The Concept of Functional Genomics; Genes and Gene Functions; Concept of Functional Genomics; Goals of Functional Genomics; Approaches to Functional Genomics; Functional Correlation of Gene Expression Profiling; Functional Correlation of Gene Positions; Expression Quantitative Trait Loci Analysis; Functional Inference by Comparative Genome Analysis; Gene Pathway Analysis
Profiling of DNA-Protein Interactions and Epigenetic Modifications Direct Test of Gene Functions; Functional Genomics Approaches Suitable for Aquaculture; Acknowledgments; References; Chapter 2 Genomic Resources for Functional Genomics in Aquaculture Species; Introduction; Polymorphic DNA Markers; Expressed Sequence Tags (ESTs); NCBI's Public dbEST; NCBI's Public UniGene; The Gene Indices; Public Sigenae Contig Browser; The US National Animal Genome Project Bioinformatics Database; Microarrays; Sequence Read Archive (SRA); Applications; SNP Genotyping Platforms
Databases for Aquaculture Species Zebrafish; Catfish; Atlantic Salmon; Fugu; Medaka; Pufferfish; Stickleback; Rainbow Trout; Whole Genome Sequence Assemblies; References; Chapter 3 Production, Growth, and Insulin-Like Growth Factor-I (IGF-I) Gene Expression as an Instantaneous Growth Indicator in Nile Tilapia Oreochromis Niloticus; Introduction; Aquaculture and Health Benefits; Economic Prominence of Tilapia; Growth Trials; The Relationship of Insulin-Like Growth Factor-I (IGF-I) to Growth; Practical Utility of IGF-I mRNA as an Indicator for Growth Rate; Conclusions; Acknowledgments
References Chapter 4 Gene Expression Pattern during European Sea Bass Larvae Development: Impact of Dietary Vitamins; Introduction; Larval to Juvenile Development: Morphological Aspects; Development of Genomic Resources and Tools; Transcriptomic Investigation of European Sea Bass Larvae Development; Organogenesis; Digestive Function; Metabolic Pathways; Impact of Nutritional Factors; Impact of Vitamin A; Impact of Vitamin D; Impact of Vitamin C; Conclusions; Acknowledgments; References; Chapter 5 Transcriptomics of the Compensatory Growth in European Sea Bass Dicentrarchus labrax; Introduction
Key Players in Fatty Acid Metabolism Key Players in Intestinal Oligopeptides Transport; Molecular Cloning and Sequencing; In Silico Analysis; Oligopeptide Transporter PepT1; Δ 6 Desaturase; Phylogenetic Analysis; Dietary Manipulation of PepT1 and Δ 6 Desaturase Gene Expression; Effect of Dietary Manipulation on Fish Growth Performances; Effect of Dietary Manipulation on Gene Expression; Δ 6 Desaturase; PepT1; Conclusions; References; Chapter 6 Functional Genomic Analysis of the Nutritional and Hormonal Regulation of Fish Glucose and Lipid Metabolism; Introduction; Carbohydrate Metabolism
Glycolysis
Record Nr. UNINA-9910139747303321
Ames, Iowa, : Wiley-Blackwell, : World Aquaculture Society, 2012
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Functional genomics in aquaculture / / edited by Marco Saroglia and Zhanjiang (John) Liu
Functional genomics in aquaculture / / edited by Marco Saroglia and Zhanjiang (John) Liu
Edizione [1st ed.]
Pubbl/distr/stampa Ames, Iowa, : Wiley-Blackwell, : World Aquaculture Society, 2012
Descrizione fisica 1 online resource (434 p.)
Disciplina 639.2
Altri autori (Persone) SarogliaMarco
LiuZhanjiang
Collana World Aquaculture Society Book series
Soggetto topico Fishes - Breeding
Shellfish - Breeding
Genomics
Aquaculture
ISBN 9786613661623
9781280684685
1280684682
9781118350010
1118350014
9781118350041
1118350049
9781118350027
1118350022
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Functional Genomics in Aquaculture; Contents; List of Contributors; Preface; Chapter 1 Functional Genomics Research in Aquaculture: Principles and General Approaches; Introduction; The Concept of Functional Genomics; Genes and Gene Functions; Concept of Functional Genomics; Goals of Functional Genomics; Approaches to Functional Genomics; Functional Correlation of Gene Expression Profiling; Functional Correlation of Gene Positions; Expression Quantitative Trait Loci Analysis; Functional Inference by Comparative Genome Analysis; Gene Pathway Analysis
Profiling of DNA-Protein Interactions and Epigenetic Modifications Direct Test of Gene Functions; Functional Genomics Approaches Suitable for Aquaculture; Acknowledgments; References; Chapter 2 Genomic Resources for Functional Genomics in Aquaculture Species; Introduction; Polymorphic DNA Markers; Expressed Sequence Tags (ESTs); NCBI's Public dbEST; NCBI's Public UniGene; The Gene Indices; Public Sigenae Contig Browser; The US National Animal Genome Project Bioinformatics Database; Microarrays; Sequence Read Archive (SRA); Applications; SNP Genotyping Platforms
Databases for Aquaculture Species Zebrafish; Catfish; Atlantic Salmon; Fugu; Medaka; Pufferfish; Stickleback; Rainbow Trout; Whole Genome Sequence Assemblies; References; Chapter 3 Production, Growth, and Insulin-Like Growth Factor-I (IGF-I) Gene Expression as an Instantaneous Growth Indicator in Nile Tilapia Oreochromis Niloticus; Introduction; Aquaculture and Health Benefits; Economic Prominence of Tilapia; Growth Trials; The Relationship of Insulin-Like Growth Factor-I (IGF-I) to Growth; Practical Utility of IGF-I mRNA as an Indicator for Growth Rate; Conclusions; Acknowledgments
References Chapter 4 Gene Expression Pattern during European Sea Bass Larvae Development: Impact of Dietary Vitamins; Introduction; Larval to Juvenile Development: Morphological Aspects; Development of Genomic Resources and Tools; Transcriptomic Investigation of European Sea Bass Larvae Development; Organogenesis; Digestive Function; Metabolic Pathways; Impact of Nutritional Factors; Impact of Vitamin A; Impact of Vitamin D; Impact of Vitamin C; Conclusions; Acknowledgments; References; Chapter 5 Transcriptomics of the Compensatory Growth in European Sea Bass Dicentrarchus labrax; Introduction
Key Players in Fatty Acid Metabolism Key Players in Intestinal Oligopeptides Transport; Molecular Cloning and Sequencing; In Silico Analysis; Oligopeptide Transporter PepT1; Δ 6 Desaturase; Phylogenetic Analysis; Dietary Manipulation of PepT1 and Δ 6 Desaturase Gene Expression; Effect of Dietary Manipulation on Fish Growth Performances; Effect of Dietary Manipulation on Gene Expression; Δ 6 Desaturase; PepT1; Conclusions; References; Chapter 6 Functional Genomic Analysis of the Nutritional and Hormonal Regulation of Fish Glucose and Lipid Metabolism; Introduction; Carbohydrate Metabolism
Glycolysis
Record Nr. UNINA-9910822826703321
Ames, Iowa, : Wiley-Blackwell, : World Aquaculture Society, 2012
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Next generation sequencing and whole genome selection in aquaculture [[electronic resource] /] / edited by Zhanjiang (John) Liu
Next generation sequencing and whole genome selection in aquaculture [[electronic resource] /] / edited by Zhanjiang (John) Liu
Pubbl/distr/stampa Ames, Iowa, : Wiley-Blackwell, 2011
Descrizione fisica 1 online resource (484 p.)
Disciplina 639.8
Altri autori (Persone) LiuZhanjiang
Soggetto topico Gene mapping
Fishes - Breeding
Shellfish - Breeding
Soggetto genere / forma Electronic books.
ISBN 0-470-95892-8
0-470-95885-5
0-470-95896-0
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Cover; Half title page; Title page; Copyright page; Preface; List of Contributors; Genetic Variations at the Genomic Level; A Review of DNA Marker Technologies; Trend of DNA Marker Technologies; Assessment of the Usefulness of Various Markers for Genome-based Selection; Acknowledgments; Chapter 1 Genomic Variations and Marker Technologies for Genome-based Selection; Characteristics of CNVs; Impact of CNVs on Gene Expression and Phenotypes; Methods for CNV Detection and Analysis; Genome-wide Association Studies Using CNV; Chapter 2 Copy Number Variations; Introduction
Next Generation Sequencing: The Current PlatformsApplication of Next Generation Sequencing Technologies; Next-Next Generation Sequencing; Perspectives; Chapter 3 Next Generation DNA Sequencing Technologies and Applications; Sample Preparation for Illumina Sequencing; Indexed Libraries for Sequencing Multiple Samples in a Single Lane; Sample Preparation for 454 Sequencing; Sample Preparation for Sequencing Multiplexed Samples Using SOLiD Sequencing; Acknowledgments; Chapter 4 Library Construction for Next Generation Sequencing; Introduction
An Example of SNP Discovery via Pyrosequencing of RRLsConclusions; Acknowledgments; Chapter 5 SNP Discovery through De Novo Deep Sequencing Using the Next Generation of DNA Sequencers; Advantages and Disadvantages of SNP Discovery through EST Data Mining; SNP Discovery Using ESTs Generated by Sanger Sequencing; SNP Discovery Using Transcript Sequences Generated by Next Generation Sequencing; Windows-Based Platforms for EST Assembly and SNP Identification; Summary; Chapter 6 SNP Discovery through EST Data Mining; Quality Assessment Parameters for EST-derived SNPs
Assessment of SNP Distribution in the GenomeQuality Issues of SNPs Generated from Sequencing RRLs; Conclusions; Chapter 7 SNP Quality Assessment; SNP Genotyping Platforms: Chemistries and Detection Methods; SNP Genotyping Platforms: Throughput and Multiplexing; SNP Genotyping Platforms: Cost and Flexibility; SNP Genotyping Platforms: Matching Platforms with Project Goals; Conclusions; Chapter 8 SNP Genotyping Platforms; Applications of SNP Markers; Genome Duplication in Fish; Identifying and Genotyping SNPs in Duplicated Fish Genomes; Concluding Remarks; Acknowledgment
Chapter 9 SNP Analysis with Duplicated Fish Genomes: Differentiation of SNPs, Paralogous Sequence Variants, and Multisite VariantsThe Steps for Genomic Selection; Traits; Breeding Value Estimation for Genomic Selection; Within-Family Genomic Selection; Effect on Genetic Gain; Accuracy of GWEBV; Quality of SNP Chip; Design of Genomic Selection Schemes for Aquaculture; Chapter 10 Genomic Selection for Aquaculture: Principles and Procedures; Introduction; Genomic Selection: Definition and Theory; Future Directions; Summary
Chapter 11 Genomic Selection in Aquaculture: Methods and Practical Considerations
Record Nr. UNINA-9910139393003321
Ames, Iowa, : Wiley-Blackwell, 2011
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Next generation sequencing and whole genome selection in aquaculture [[electronic resource] /] / edited by Zhanjiang (John) Liu
Next generation sequencing and whole genome selection in aquaculture [[electronic resource] /] / edited by Zhanjiang (John) Liu
Pubbl/distr/stampa Ames, Iowa, : Wiley-Blackwell, 2011
Descrizione fisica 1 online resource (484 p.)
Disciplina 639.8
Altri autori (Persone) LiuZhanjiang
Soggetto topico Gene mapping
Fishes - Breeding
Shellfish - Breeding
ISBN 0-470-95892-8
0-470-95885-5
0-470-95896-0
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Cover; Half title page; Title page; Copyright page; Preface; List of Contributors; Genetic Variations at the Genomic Level; A Review of DNA Marker Technologies; Trend of DNA Marker Technologies; Assessment of the Usefulness of Various Markers for Genome-based Selection; Acknowledgments; Chapter 1 Genomic Variations and Marker Technologies for Genome-based Selection; Characteristics of CNVs; Impact of CNVs on Gene Expression and Phenotypes; Methods for CNV Detection and Analysis; Genome-wide Association Studies Using CNV; Chapter 2 Copy Number Variations; Introduction
Next Generation Sequencing: The Current PlatformsApplication of Next Generation Sequencing Technologies; Next-Next Generation Sequencing; Perspectives; Chapter 3 Next Generation DNA Sequencing Technologies and Applications; Sample Preparation for Illumina Sequencing; Indexed Libraries for Sequencing Multiple Samples in a Single Lane; Sample Preparation for 454 Sequencing; Sample Preparation for Sequencing Multiplexed Samples Using SOLiD Sequencing; Acknowledgments; Chapter 4 Library Construction for Next Generation Sequencing; Introduction
An Example of SNP Discovery via Pyrosequencing of RRLsConclusions; Acknowledgments; Chapter 5 SNP Discovery through De Novo Deep Sequencing Using the Next Generation of DNA Sequencers; Advantages and Disadvantages of SNP Discovery through EST Data Mining; SNP Discovery Using ESTs Generated by Sanger Sequencing; SNP Discovery Using Transcript Sequences Generated by Next Generation Sequencing; Windows-Based Platforms for EST Assembly and SNP Identification; Summary; Chapter 6 SNP Discovery through EST Data Mining; Quality Assessment Parameters for EST-derived SNPs
Assessment of SNP Distribution in the GenomeQuality Issues of SNPs Generated from Sequencing RRLs; Conclusions; Chapter 7 SNP Quality Assessment; SNP Genotyping Platforms: Chemistries and Detection Methods; SNP Genotyping Platforms: Throughput and Multiplexing; SNP Genotyping Platforms: Cost and Flexibility; SNP Genotyping Platforms: Matching Platforms with Project Goals; Conclusions; Chapter 8 SNP Genotyping Platforms; Applications of SNP Markers; Genome Duplication in Fish; Identifying and Genotyping SNPs in Duplicated Fish Genomes; Concluding Remarks; Acknowledgment
Chapter 9 SNP Analysis with Duplicated Fish Genomes: Differentiation of SNPs, Paralogous Sequence Variants, and Multisite VariantsThe Steps for Genomic Selection; Traits; Breeding Value Estimation for Genomic Selection; Within-Family Genomic Selection; Effect on Genetic Gain; Accuracy of GWEBV; Quality of SNP Chip; Design of Genomic Selection Schemes for Aquaculture; Chapter 10 Genomic Selection for Aquaculture: Principles and Procedures; Introduction; Genomic Selection: Definition and Theory; Future Directions; Summary
Chapter 11 Genomic Selection in Aquaculture: Methods and Practical Considerations
Record Nr. UNINA-9910830902803321
Ames, Iowa, : Wiley-Blackwell, 2011
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Next generation sequencing and whole genome selection in aquaculture / / edited by Zhanjiang (John) Liu
Next generation sequencing and whole genome selection in aquaculture / / edited by Zhanjiang (John) Liu
Pubbl/distr/stampa Ames, Iowa, : Wiley-Blackwell, 2011
Descrizione fisica 1 online resource (484 p.)
Disciplina 639.8
Altri autori (Persone) LiuZhanjiang
Soggetto topico Gene mapping
Fishes - Breeding
Shellfish - Breeding
ISBN 9780470958926
0470958928
9780470958858
0470958855
9780470958964
0470958960
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Cover; Half title page; Title page; Copyright page; Preface; List of Contributors; Genetic Variations at the Genomic Level; A Review of DNA Marker Technologies; Trend of DNA Marker Technologies; Assessment of the Usefulness of Various Markers for Genome-based Selection; Acknowledgments; Chapter 1 Genomic Variations and Marker Technologies for Genome-based Selection; Characteristics of CNVs; Impact of CNVs on Gene Expression and Phenotypes; Methods for CNV Detection and Analysis; Genome-wide Association Studies Using CNV; Chapter 2 Copy Number Variations; Introduction
Next Generation Sequencing: The Current PlatformsApplication of Next Generation Sequencing Technologies; Next-Next Generation Sequencing; Perspectives; Chapter 3 Next Generation DNA Sequencing Technologies and Applications; Sample Preparation for Illumina Sequencing; Indexed Libraries for Sequencing Multiple Samples in a Single Lane; Sample Preparation for 454 Sequencing; Sample Preparation for Sequencing Multiplexed Samples Using SOLiD Sequencing; Acknowledgments; Chapter 4 Library Construction for Next Generation Sequencing; Introduction
An Example of SNP Discovery via Pyrosequencing of RRLsConclusions; Acknowledgments; Chapter 5 SNP Discovery through De Novo Deep Sequencing Using the Next Generation of DNA Sequencers; Advantages and Disadvantages of SNP Discovery through EST Data Mining; SNP Discovery Using ESTs Generated by Sanger Sequencing; SNP Discovery Using Transcript Sequences Generated by Next Generation Sequencing; Windows-Based Platforms for EST Assembly and SNP Identification; Summary; Chapter 6 SNP Discovery through EST Data Mining; Quality Assessment Parameters for EST-derived SNPs
Assessment of SNP Distribution in the GenomeQuality Issues of SNPs Generated from Sequencing RRLs; Conclusions; Chapter 7 SNP Quality Assessment; SNP Genotyping Platforms: Chemistries and Detection Methods; SNP Genotyping Platforms: Throughput and Multiplexing; SNP Genotyping Platforms: Cost and Flexibility; SNP Genotyping Platforms: Matching Platforms with Project Goals; Conclusions; Chapter 8 SNP Genotyping Platforms; Applications of SNP Markers; Genome Duplication in Fish; Identifying and Genotyping SNPs in Duplicated Fish Genomes; Concluding Remarks; Acknowledgment
Chapter 9 SNP Analysis with Duplicated Fish Genomes: Differentiation of SNPs, Paralogous Sequence Variants, and Multisite VariantsThe Steps for Genomic Selection; Traits; Breeding Value Estimation for Genomic Selection; Within-Family Genomic Selection; Effect on Genetic Gain; Accuracy of GWEBV; Quality of SNP Chip; Design of Genomic Selection Schemes for Aquaculture; Chapter 10 Genomic Selection for Aquaculture: Principles and Procedures; Introduction; Genomic Selection: Definition and Theory; Future Directions; Summary
Chapter 11 Genomic Selection in Aquaculture: Methods and Practical Considerations
Record Nr. UNINA-9911020081503321
Ames, Iowa, : Wiley-Blackwell, 2011
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui