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Biological nitrogen fixation / / edited by Frans J. de Bruijn
| Biological nitrogen fixation / / edited by Frans J. de Bruijn |
| Pubbl/distr/stampa | Hoboken, New Jersey : , : Wiley-Blackwell, , 2015 |
| Descrizione fisica | 1 online resource (1236 p.) |
| Disciplina | 581.13353 |
| Soggetto topico | Nitrogen - Fixation |
| Soggetto genere / forma | Electronic books. |
| ISBN |
1-118-63721-6
1-119-05309-9 1-118-63709-7 |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Cover; Title Page; Copyright; Dedication; Contents; Preface; Acknowledgments; Contributors; Volume 1; Chapter 1. Introduction; 1.1 Free-Living Diazotrophs; 1.2 Symbiotic Nitrogen-Fixing Bacteria; 1.3 Associative Nitrogen-Fixing Bacteria; 1.4 Outline of This Book; Section 1 Focus Chapters; Chapter 2. Recent Advances in Understanding Nitrogenases and How They Work; 2.1 Introduction: Two Types of Nitrogenases Exist; 2.2 Occurrence and Relationships among the Group-1 Nitrogenases; 2.3 Overview of Properties of Mo-Nitrogenase; 2.4 Overview of Properties of V-Nitrogenase and Fe-Nitrogenase
2.5 Structures of the Nitrogenase Component Proteins and their Complexes2.6 Structures of the MoFe-Protein Prosthetic Groups; 2.7 How are Substrates Reduced?; 2.8 Where are the Binding Sites for Substrates and Inhibitors?; 2.9 How are Electrons and Protons Delivered?; 2.10 Some Concluding Remarks; Chapter 3. Evolution and Taxonomy of Nitrogen-Fixing Organisms with Emphasis on Rhizobia; 3.1 Introduction; 3.2 Materials and Methods; 3.3 Results; 3.4 Discussion; 3.4 NOTE; 3.4 Acknowledgments Chapter 4. Evolution of Rhizobium Nodulation: From Nodule-Specific Genes (Nodulins) to Recruitment of Common Processes4.1 Nodule Formation in a Nutshell; 4.2 Signaling in Symbiosis; 4.3 The Indeterminate Nodule; 4.4 Signaling Inside the Nodule; 4.5 Rhizobium Symbiosis in Parasponia; 4.6 Actinorhizal N-Fixing Symbiosis; 4.7 Arbuscular Mycorrhizal Symbiosis; 4.8 Interactions with (Biotrophic) Pathogens; 4.9 The Evolution of the Rhizobium Nodule Symbiosis; Chapter 5. Bioengineering Nitrogen Acquisition in Rice: Promises for Global Food Security; 5.1 Introduction 5.2 Primary Nitrogen Uptake and Nitrogen-Use Efficiency: Gene Candidates and Caveats5.3 The Carbon-Nitrogen Interface and N-Transfer: Removing Enzymatic Bottlenecks; 5.4 Nitrogen Fixation: The Holy Grail; 5.5 Concluding Remarks; Section 2 Chemistry and Biochemistry of Nitrogenases; Chapter 6. An Overview on Fe-S Protein Biogenesis from Prokaryotes to Eukaryotes; 6.1 Introduction; 6.2 Source of Iron and Sulfur; 6.3 Structures and Properties of Fe-S Clusters; 6.4 Formation of Fe-S Clusters; 6.5 Diverse Functions of Fe-S Proteins; 6.6 Fe-S Cluster Biosynthesis in Prokaryotes 6.7 ISC Assembly Machinery6.8 The Suf Machinery in Bacteria and Plastids; 6.9 Fe-S Protein Assembly in Eukaryotes; 6.10 Mitochondrial ISC Assembly Machinery; 6.11 Mitochondrial ISC Export System; 6.12 CIA Assembly Apparatus; 6.13 Conclusion; 6.13 Acknowledgments; Chapter 7. Biosynthesis of the Iron-Molybdenum Cofactor of Nitrogenase; 7.1 Introduction: Dinitrogenase and Apo-Dinitrogenase; 7.2 NifU AND NifS; 7.3 NifB: FROM SIMPLE [Fe-S] CLUSTERS TO THE CORE OF FeMo-co; 7.4 NifQ: DIRECTING Mo TO FeMo-co SYNTHESIS; 7.5 NifV and the Incorporation of Homocitrate into FeMo-co 7.6 NifEN: A NODE IN THE FeMo-co BIOSYNTHETIC PATHWAY |
| Record Nr. | UNINA-9910131431003321 |
| Hoboken, New Jersey : , : Wiley-Blackwell, , 2015 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Biological nitrogen fixation / / edited by Frans J. de Bruijn
| Biological nitrogen fixation / / edited by Frans J. de Bruijn |
| Pubbl/distr/stampa | Hoboken, New Jersey : , : Wiley-Blackwell, , 2015 |
| Descrizione fisica | 1 online resource (1236 p.) |
| Disciplina | 581.13353 |
| Soggetto topico | Nitrogen - Fixation |
| ISBN |
1-118-63721-6
1-119-05309-9 1-118-63709-7 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Cover; Title Page; Copyright; Dedication; Contents; Preface; Acknowledgments; Contributors; Volume 1; Chapter 1. Introduction; 1.1 Free-Living Diazotrophs; 1.2 Symbiotic Nitrogen-Fixing Bacteria; 1.3 Associative Nitrogen-Fixing Bacteria; 1.4 Outline of This Book; Section 1 Focus Chapters; Chapter 2. Recent Advances in Understanding Nitrogenases and How They Work; 2.1 Introduction: Two Types of Nitrogenases Exist; 2.2 Occurrence and Relationships among the Group-1 Nitrogenases; 2.3 Overview of Properties of Mo-Nitrogenase; 2.4 Overview of Properties of V-Nitrogenase and Fe-Nitrogenase
2.5 Structures of the Nitrogenase Component Proteins and their Complexes2.6 Structures of the MoFe-Protein Prosthetic Groups; 2.7 How are Substrates Reduced?; 2.8 Where are the Binding Sites for Substrates and Inhibitors?; 2.9 How are Electrons and Protons Delivered?; 2.10 Some Concluding Remarks; Chapter 3. Evolution and Taxonomy of Nitrogen-Fixing Organisms with Emphasis on Rhizobia; 3.1 Introduction; 3.2 Materials and Methods; 3.3 Results; 3.4 Discussion; 3.4 NOTE; 3.4 Acknowledgments Chapter 4. Evolution of Rhizobium Nodulation: From Nodule-Specific Genes (Nodulins) to Recruitment of Common Processes4.1 Nodule Formation in a Nutshell; 4.2 Signaling in Symbiosis; 4.3 The Indeterminate Nodule; 4.4 Signaling Inside the Nodule; 4.5 Rhizobium Symbiosis in Parasponia; 4.6 Actinorhizal N-Fixing Symbiosis; 4.7 Arbuscular Mycorrhizal Symbiosis; 4.8 Interactions with (Biotrophic) Pathogens; 4.9 The Evolution of the Rhizobium Nodule Symbiosis; Chapter 5. Bioengineering Nitrogen Acquisition in Rice: Promises for Global Food Security; 5.1 Introduction 5.2 Primary Nitrogen Uptake and Nitrogen-Use Efficiency: Gene Candidates and Caveats5.3 The Carbon-Nitrogen Interface and N-Transfer: Removing Enzymatic Bottlenecks; 5.4 Nitrogen Fixation: The Holy Grail; 5.5 Concluding Remarks; Section 2 Chemistry and Biochemistry of Nitrogenases; Chapter 6. An Overview on Fe-S Protein Biogenesis from Prokaryotes to Eukaryotes; 6.1 Introduction; 6.2 Source of Iron and Sulfur; 6.3 Structures and Properties of Fe-S Clusters; 6.4 Formation of Fe-S Clusters; 6.5 Diverse Functions of Fe-S Proteins; 6.6 Fe-S Cluster Biosynthesis in Prokaryotes 6.7 ISC Assembly Machinery6.8 The Suf Machinery in Bacteria and Plastids; 6.9 Fe-S Protein Assembly in Eukaryotes; 6.10 Mitochondrial ISC Assembly Machinery; 6.11 Mitochondrial ISC Export System; 6.12 CIA Assembly Apparatus; 6.13 Conclusion; 6.13 Acknowledgments; Chapter 7. Biosynthesis of the Iron-Molybdenum Cofactor of Nitrogenase; 7.1 Introduction: Dinitrogenase and Apo-Dinitrogenase; 7.2 NifU AND NifS; 7.3 NifB: FROM SIMPLE [Fe-S] CLUSTERS TO THE CORE OF FeMo-co; 7.4 NifQ: DIRECTING Mo TO FeMo-co SYNTHESIS; 7.5 NifV and the Incorporation of Homocitrate into FeMo-co 7.6 NifEN: A NODE IN THE FeMo-co BIOSYNTHETIC PATHWAY |
| Record Nr. | UNINA-9910830427603321 |
| Hoboken, New Jersey : , : Wiley-Blackwell, , 2015 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Legume nodulation [[electronic resource] ] : a global perspective / / Janet I Sprent
| Legume nodulation [[electronic resource] ] : a global perspective / / Janet I Sprent |
| Autore | Sprent Janet I |
| Pubbl/distr/stampa | Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2009 |
| Descrizione fisica | 1 online resource (220 p.) |
| Disciplina |
572/.5452374
633.3 |
| Soggetto topico |
Legumes - Roots - Physiology
Nitrogen-fixing microorganisms Nitrogen - Fixation |
| Soggetto genere / forma | Electronic books. |
| ISBN |
1-282-34375-0
9786612343759 1-4443-1638-9 1-4443-1639-7 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Legume Nodulation A Global Perspective; Contents; Preface; 1 Nodulation in a Taxonomic Context; 1.1 Caesalpinioideae; 1.2 Mimosoideae; 1.2.1 Acacieae; 1.2.2 Ingeae; 1.2.3 Mimoseae; 1.3 Papilionoideae; 1.3.1 Non-nodulation in the Papilionoideae; 1.3.2 Nodulating papilionoids with primitive nodule structure; 1.3.3 Tribes with the 50kb inversion; 1.3.4 The Dalbergioid clade; 1.3.5 The Mirbelioid clade; 1.3.6 The Millettioid clade; 1.3.7 The Robinioid clade; 1.3.8 The inverted repeat lacking clade (IRLC); 2 Global Distribution of Legumes; 2.1 Deserts; 2.2 Savannas; 2.2.1 African savannas
2.2.2 Neotropical savannas2.2.3 Australian savannas; 2.3 Seasonally dry tropical forests (succulent biome); 2.3.1 Caatinga; 2.3.2 Other areas; 2.4 Rain forests; 2.4.1 Atlantic forest; 2.4.2 Temperate rain forests; 2.4.3 Tropical rain forests; 2.5 Temperate regions; 2.5.1 Mediterranean ecosystems; 2.5.2 Temperate, boreal and high altitude legumes; 2.6 Invasive legumes; 3 Evolution of Nodulation; 3.1 When did nodulation first occur?; 3.2 Where did nodulation first occur, and where are nodulated legumes going?; 3.2.1 Madagascar as a special case; 3.2.2 Recent evolution 3.3 How was the information for nodulation acquired?3.3.1 Ancient genes that have been recruited for symbiotic purposes; 3.3.2 Gene duplication; 3.4 Why was nodulation necessary?; 3.5 Model legumes; 4 Bacteria Nodulating Legumes; 4.1 -Proteobacteria; 4.1.1 Rhizobium; 4.1.2 Sinorhizobium and Ensifer; 4.1.3 Other members of Rhizobiaceae; 4.1.4 Bradyrhizobium; 4.1.5 Azorhizobium and Devosia; 4.1.6 Methylobacterium; 4.1.7 Ochrobactrum; 4.1.8 Mesorhizobium; 4.1.9 Phyllobacterium; 4.2 -Proteobacteria; 4.3 Other bacterial nodule occupants; 4.4 Specificity; 4.5 Competition 4.6 Stability and genetic exchange5 Development and Functioning of Nodules; 5.1 Root hair infection; 5.2 The roles of hormones; 5.3 Autoregulation; 5.4 Formation of symbiosomes; 5.4.1 Bacteroid size and shape; 5.4.2 The role of poly- -hydroxybutyrate (PHB); 5.5 Nodules lacking root hair infection; 5.5.1 Dalbergioid legumes; 5.5.2 Genisteae and Crotalarieae; 5.5.3 The special case of Sesbania; 5.6 Other variations in nodule structure; 5.7 Functioning nodules: the critical role of oxygen; 5.8 Nitrogen fixation and export of products; 5.8.1 The hydrogen enigma; 5.9 Nodule effectiveness 5.10 The bacteria within the nodule - control by the bacteria, plant or both?5.11 Constraints on nitrogen fixation in agriculture and the environment; 5.11.1 Waterlogging, drought and salinity; 5.11.2 Temperature; 5.11.3 Edaphic factors; 5.12 Legumes, pests and pathogens; 6 Some Legumes for the Future?; 6.1 Human food; 6.1.1 Vigna spp.; 6.1.2 Other phaseoloid legumes; 6.2 Forage legumes; 6.3 Pharmaceutical uses; 6.4 Other uses; Appendices; I Caesalpinioideae; II Mimosoideae; III Papilionoideae; References; Taxonomic Index; General Index; Color plate section between pages 86 and 87; Rest |
| Record Nr. | UNINA-9910139781503321 |
Sprent Janet I
|
||
| Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2009 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Legume nodulation [[electronic resource] ] : a global perspective / / Janet I Sprent
| Legume nodulation [[electronic resource] ] : a global perspective / / Janet I Sprent |
| Autore | Sprent Janet I |
| Pubbl/distr/stampa | Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2009 |
| Descrizione fisica | 1 online resource (220 p.) |
| Disciplina |
572/.5452374
633.3 |
| Soggetto topico |
Legumes - Roots - Physiology
Nitrogen-fixing microorganisms Nitrogen - Fixation |
| ISBN |
1-282-34375-0
9786612343759 1-4443-1638-9 1-4443-1639-7 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Legume Nodulation A Global Perspective; Contents; Preface; 1 Nodulation in a Taxonomic Context; 1.1 Caesalpinioideae; 1.2 Mimosoideae; 1.2.1 Acacieae; 1.2.2 Ingeae; 1.2.3 Mimoseae; 1.3 Papilionoideae; 1.3.1 Non-nodulation in the Papilionoideae; 1.3.2 Nodulating papilionoids with primitive nodule structure; 1.3.3 Tribes with the 50kb inversion; 1.3.4 The Dalbergioid clade; 1.3.5 The Mirbelioid clade; 1.3.6 The Millettioid clade; 1.3.7 The Robinioid clade; 1.3.8 The inverted repeat lacking clade (IRLC); 2 Global Distribution of Legumes; 2.1 Deserts; 2.2 Savannas; 2.2.1 African savannas
2.2.2 Neotropical savannas2.2.3 Australian savannas; 2.3 Seasonally dry tropical forests (succulent biome); 2.3.1 Caatinga; 2.3.2 Other areas; 2.4 Rain forests; 2.4.1 Atlantic forest; 2.4.2 Temperate rain forests; 2.4.3 Tropical rain forests; 2.5 Temperate regions; 2.5.1 Mediterranean ecosystems; 2.5.2 Temperate, boreal and high altitude legumes; 2.6 Invasive legumes; 3 Evolution of Nodulation; 3.1 When did nodulation first occur?; 3.2 Where did nodulation first occur, and where are nodulated legumes going?; 3.2.1 Madagascar as a special case; 3.2.2 Recent evolution 3.3 How was the information for nodulation acquired?3.3.1 Ancient genes that have been recruited for symbiotic purposes; 3.3.2 Gene duplication; 3.4 Why was nodulation necessary?; 3.5 Model legumes; 4 Bacteria Nodulating Legumes; 4.1 -Proteobacteria; 4.1.1 Rhizobium; 4.1.2 Sinorhizobium and Ensifer; 4.1.3 Other members of Rhizobiaceae; 4.1.4 Bradyrhizobium; 4.1.5 Azorhizobium and Devosia; 4.1.6 Methylobacterium; 4.1.7 Ochrobactrum; 4.1.8 Mesorhizobium; 4.1.9 Phyllobacterium; 4.2 -Proteobacteria; 4.3 Other bacterial nodule occupants; 4.4 Specificity; 4.5 Competition 4.6 Stability and genetic exchange5 Development and Functioning of Nodules; 5.1 Root hair infection; 5.2 The roles of hormones; 5.3 Autoregulation; 5.4 Formation of symbiosomes; 5.4.1 Bacteroid size and shape; 5.4.2 The role of poly- -hydroxybutyrate (PHB); 5.5 Nodules lacking root hair infection; 5.5.1 Dalbergioid legumes; 5.5.2 Genisteae and Crotalarieae; 5.5.3 The special case of Sesbania; 5.6 Other variations in nodule structure; 5.7 Functioning nodules: the critical role of oxygen; 5.8 Nitrogen fixation and export of products; 5.8.1 The hydrogen enigma; 5.9 Nodule effectiveness 5.10 The bacteria within the nodule - control by the bacteria, plant or both?5.11 Constraints on nitrogen fixation in agriculture and the environment; 5.11.1 Waterlogging, drought and salinity; 5.11.2 Temperature; 5.11.3 Edaphic factors; 5.12 Legumes, pests and pathogens; 6 Some Legumes for the Future?; 6.1 Human food; 6.1.1 Vigna spp.; 6.1.2 Other phaseoloid legumes; 6.2 Forage legumes; 6.3 Pharmaceutical uses; 6.4 Other uses; Appendices; I Caesalpinioideae; II Mimosoideae; III Papilionoideae; References; Taxonomic Index; General Index; Color plate section between pages 86 and 87; Rest |
| Record Nr. | UNINA-9910830310303321 |
|
Sprent Janet I
|
||
| Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2009 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Legume nodulation [[electronic resource] ] : a global perspective / / Janet I Sprent
| Legume nodulation [[electronic resource] ] : a global perspective / / Janet I Sprent |
| Autore | Sprent Janet I |
| Pubbl/distr/stampa | Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2009 |
| Descrizione fisica | 1 online resource (220 p.) |
| Disciplina |
572/.5452374
633.3 |
| Soggetto topico |
Legumes - Roots - Physiology
Nitrogen-fixing microorganisms Nitrogen - Fixation |
| ISBN |
1-282-34375-0
9786612343759 1-4443-1638-9 1-4443-1639-7 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Legume Nodulation A Global Perspective; Contents; Preface; 1 Nodulation in a Taxonomic Context; 1.1 Caesalpinioideae; 1.2 Mimosoideae; 1.2.1 Acacieae; 1.2.2 Ingeae; 1.2.3 Mimoseae; 1.3 Papilionoideae; 1.3.1 Non-nodulation in the Papilionoideae; 1.3.2 Nodulating papilionoids with primitive nodule structure; 1.3.3 Tribes with the 50kb inversion; 1.3.4 The Dalbergioid clade; 1.3.5 The Mirbelioid clade; 1.3.6 The Millettioid clade; 1.3.7 The Robinioid clade; 1.3.8 The inverted repeat lacking clade (IRLC); 2 Global Distribution of Legumes; 2.1 Deserts; 2.2 Savannas; 2.2.1 African savannas
2.2.2 Neotropical savannas2.2.3 Australian savannas; 2.3 Seasonally dry tropical forests (succulent biome); 2.3.1 Caatinga; 2.3.2 Other areas; 2.4 Rain forests; 2.4.1 Atlantic forest; 2.4.2 Temperate rain forests; 2.4.3 Tropical rain forests; 2.5 Temperate regions; 2.5.1 Mediterranean ecosystems; 2.5.2 Temperate, boreal and high altitude legumes; 2.6 Invasive legumes; 3 Evolution of Nodulation; 3.1 When did nodulation first occur?; 3.2 Where did nodulation first occur, and where are nodulated legumes going?; 3.2.1 Madagascar as a special case; 3.2.2 Recent evolution 3.3 How was the information for nodulation acquired?3.3.1 Ancient genes that have been recruited for symbiotic purposes; 3.3.2 Gene duplication; 3.4 Why was nodulation necessary?; 3.5 Model legumes; 4 Bacteria Nodulating Legumes; 4.1 -Proteobacteria; 4.1.1 Rhizobium; 4.1.2 Sinorhizobium and Ensifer; 4.1.3 Other members of Rhizobiaceae; 4.1.4 Bradyrhizobium; 4.1.5 Azorhizobium and Devosia; 4.1.6 Methylobacterium; 4.1.7 Ochrobactrum; 4.1.8 Mesorhizobium; 4.1.9 Phyllobacterium; 4.2 -Proteobacteria; 4.3 Other bacterial nodule occupants; 4.4 Specificity; 4.5 Competition 4.6 Stability and genetic exchange5 Development and Functioning of Nodules; 5.1 Root hair infection; 5.2 The roles of hormones; 5.3 Autoregulation; 5.4 Formation of symbiosomes; 5.4.1 Bacteroid size and shape; 5.4.2 The role of poly- -hydroxybutyrate (PHB); 5.5 Nodules lacking root hair infection; 5.5.1 Dalbergioid legumes; 5.5.2 Genisteae and Crotalarieae; 5.5.3 The special case of Sesbania; 5.6 Other variations in nodule structure; 5.7 Functioning nodules: the critical role of oxygen; 5.8 Nitrogen fixation and export of products; 5.8.1 The hydrogen enigma; 5.9 Nodule effectiveness 5.10 The bacteria within the nodule - control by the bacteria, plant or both?5.11 Constraints on nitrogen fixation in agriculture and the environment; 5.11.1 Waterlogging, drought and salinity; 5.11.2 Temperature; 5.11.3 Edaphic factors; 5.12 Legumes, pests and pathogens; 6 Some Legumes for the Future?; 6.1 Human food; 6.1.1 Vigna spp.; 6.1.2 Other phaseoloid legumes; 6.2 Forage legumes; 6.3 Pharmaceutical uses; 6.4 Other uses; Appendices; I Caesalpinioideae; II Mimosoideae; III Papilionoideae; References; Taxonomic Index; General Index; Color plate section between pages 86 and 87; Rest |
| Record Nr. | UNINA-9910840532903321 |
|
Sprent Janet I
|
||
| Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2009 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Marine nitrogen fixation / / Jonathan P. Zehr, Douglas G. Capone
| Marine nitrogen fixation / / Jonathan P. Zehr, Douglas G. Capone |
| Autore | Zehr Jonathan P. |
| Pubbl/distr/stampa | Cham, Switzerland : , : Springer, , [2021] |
| Descrizione fisica | 1 online resource (191 pages) |
| Disciplina | 589.704133 |
| Soggetto topico | Nitrogen - Fixation |
| ISBN | 3-030-67746-X |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Intro -- Foreword -- References -- Preface -- Acknowledgments -- Contents -- Chapter 1: Nitrogen Fixation in the Marine Environment -- 1.1 The Nitrogen Cycle -- 1.2 Terrestrial and Aquatic Environments -- References -- Chapter 2: Fundamentals of N2 Fixation -- 2.1 Microbiology -- 2.2 Nitrogen Fixation Reaction and Nitrogenases -- 2.3 The Biological Nitrogen Fixation Reaction -- 2.4 Non-structural nif Genes and Protein Assembly -- 2.5 Cellular Regulation of Nitrogenase -- 2.6 Conclusions -- References -- Chapter 3: History of Research on Marine N2 Fixation -- 3.1 History of Studies of Marine N2 Fixation -- 3.2 Process Oriented Studies: Water Column -- 3.3 Benthic Marine Environments -- 3.4 Concluding Remarks -- References -- Chapter 4: Microorganisms and Habitats -- 4.1 The Surface Ocean (Pelagic) -- Cyanobacteria -- Heterotrophic N2 Fixers -- 4.2 Oxygen Deficient Zones (ODZs) -- 4.3 Mesopelagic and Deep Ocean -- 4.4 The Benthos -- Microbial Mats -- Shallow Sediments -- Corals and Coral Reefs -- Marine Plant Communities -- Deep Sea Benthos -- 4.5 Conclusions -- References -- Chapter 5: Measurements of Organism Abundances and Activities -- 5.1 Introduction -- 5.2 Cultivation -- 5.3 The Acetylene Reduction Method -- 5.4 Isotopic Tracers: 15N -- 5.5 Hydrogen -- 5.6 Functional Gene Analysis -- 5.7 Stable Isotope Probing -- 5.8 Biogeochemical Proxies -- 5.9 Remote Sensing -- 5.10 Experimental and Observational Formats and Scales -- 5.11 Mathematical Models -- 5.12 Conclusions -- References -- Chapter 6: Factors Controlling N2 Fixation -- 6.1 Oxygen -- 6.2 Light -- 6.3 Temperature -- 6.4 Nutrients -- 6.5 Dissolved Organic Matter -- 6.6 Salinity -- 6.7 pH -- 6.8 Turbulence -- 6.9 Fate of Diazotrophs -- 6.10 Conclusions -- References -- Chapter 7: Biogeography of N2 Fixation in the Surface Ocean.
7.1 Factors Controlling the Distribution of N2 Fixation Biogeography -- 7.2 Nutrient Limitation Geography -- 7.3 N2 Fixation Variables -- 7.4 Oligotrophic Oceans -- 7.5 Coastal and Upwelling Regions -- 7.6 Seasonality -- 7.7 Low O2 Waters -- 7.8 Estuaries and Inland Seas -- 7.9 High Latitudes Including the Arctic -- 7.10 Conclusions -- References -- Chapter 8: N2 Fixation in Ocean Basins -- 8.1 Nutrient Relationships, Ratios and N Cycle Feedbacks -- Stable Isotope Inferences -- The N* Parameter and N2 Fixation -- 8.2 Basin and Global Scale Inputs -- Pelagic Studies -- Heterotrophic N2 Fixation Inputs -- Benthic Studies -- 8.3 Conclusions -- References -- Chapter 9: Marine N2 Fixation, Global Change and the Future -- 9.1 Effects of Environmental Changes on Species -- 9.2 Large-Scale Shifts in N2 Fixation in the Global Ocean -- 9.3 Ocean Fertilization and Marine N2 Fixation -- 9.4 Marine Aquaculture, Biotechnology and N2 Fixation -- 9.5 Overcoming Challenges for Future N2 Fixation Research -- 9.6 Conclusions -- References -- Chapter 10: Summary and Conclusions -- 10.1 Introduction -- 10.2 Fundamentals -- 10.3 History -- 10.4 Microorganisms -- 10.5 Measurements -- 10.6 Factors -- 10.7 Biogeography -- 10.8 N2 Fixation in Ocean Basins -- 10.9 Marine N2 Fixation, Global Change and the Future -- 10.10 Over-Arching Questions, Controversies and Future Directions -- Microbiological -- Physiological -- Ecological/Biogeochemical -- Methodological/Technological -- 10.11 Closing Comments -- Index. |
| Record Nr. | UNINA-9910483422203321 |
|
Zehr Jonathan P.
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| Cham, Switzerland : , : Springer, , [2021] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Metagenomics of the microbial nitrogen cycle : theory, methods and applications / / Edited by Diana Marco
| Metagenomics of the microbial nitrogen cycle : theory, methods and applications / / Edited by Diana Marco |
| Pubbl/distr/stampa | Norfolk, England : , : Caister Academic Press, , [2014] |
| Descrizione fisica | 1 online resource (283 p.) |
| Disciplina | 579.17 |
| Soggetto topico |
Microbial ecology
Nitrogen - Fixation Microbial genomics Nitrogen cycle |
| Soggetto genere / forma | Electronic books. |
| ISBN | 1-908230-60-6 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Contents ; Contributors; Preface; Foreword; 1: Functional Assignment of Metagenomic Data: Insights for the Microbial Nitrogen Cycle; Introduction; Microbial nitrogen cycle; Exploring the nitrogen cycle using genomic and metagenomic techniques; Terrestrial nitrogen cycle; Aquatic nitrogen cycle; Future scope; 2: Microbial Metagenomics of Oxygen Minimum Zones; Introduction; Metagenomic insights into OMZ metabolism; Drivers of community structure; Challenges; 3: Interactions between Methane and Nitrogen Cycling: Current Metagenomic Studies and Future Trends; Introduction
Interactions between methane and nitrogen cyclingCurrent metagenomic studies; Future perspective; 4: Quantification of Functional Microbial Nitrogen Cycle Genes in Environmental Samples; Introduction; N cycle; Analysis of N cycle-related functional communities; cPCR and qPCR; Quantification of functional genes using qPCR; 5: Stable Isotope Probing the Nitrogen Cycle: Current Applications and Future Directions; Introduction; Nitrogen uptake is limited in many environments; The utility of molecular approaches; DNA stable isotope probing; 15N-DNA stable isotope probing; Nitrogen fixation Biodegradation and bioremediationInorganic N cycling; Organic nitrogen; The way forward; Metagenomics; Combining 15N-SIP, metagenomic sequencing and flow cytometry; Protein stable isotope probing; Chip stable isotope probing; Conclusions; 6: Application of Metaproteomics to the Exploration of Microbial N-cycling Communities; Introduction; Metaproteomics and the nitrogen cycle; Protein-SIP and the nitrogen cycle; Proteomics of microbial isolates relevant to the nitrogen cycle; Conclusions; Future trends 7: Functional Molecular Analysis of Microbial Nitrogen Cycle by Microarray-based GeoChip: Insights for Climate Change, Agriculture and Other Ecological StudiesIntroduction; Microarray technology and functional gene array; GeoChip technology; GeoChip application in investigating N functional genes; Challenges for GeoChip technology and future directions; 8: Functional and Taxonomic Diversity of the Nitrogen Cycling Guild in the Sargasso Sea Metagenomes; Introduction; Taxonomic diversity of the Sargasso Sea microbial communities; Functional diversity of the N-cycling guild in the Sargasso Sea DiscussionExclusion by filtering; A cautionary tale on ignoring the masses; Future trends; 9: Microbial Nitrogen Cycle: Determination of Microbial Functional Activities and Related N-compounds in Environmental Samples; Introduction; Microbial functional activities of the N-cycle; Determination of some N-compounds relative to the N-cycle; 10: Functional Metagenomics of the Nitrogen Cycle in Freshwater Lakes with Focus on Methylotrophic Bacteria; Introduction; Functional metagenomics uncover the dominant methylotrophs, Methylobacter and Methylotenera, and identify nitrogen metabolism strategies Nitrate supplement causes specific responses by the Methylophilaceae ecotypes |
| Record Nr. | UNINA-9910464511703321 |
| Norfolk, England : , : Caister Academic Press, , [2014] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Metagenomics of the microbial nitrogen cycle : theory, methods and applications / / Edited by Diana Marco
| Metagenomics of the microbial nitrogen cycle : theory, methods and applications / / Edited by Diana Marco |
| Pubbl/distr/stampa | Norfolk, England : , : Caister Academic Press, , [2014] |
| Descrizione fisica | 1 online resource (283 p.) |
| Disciplina | 579.17 |
| Soggetto topico |
Microbial ecology
Nitrogen - Fixation Microbial genomics Nitrogen cycle |
| ISBN | 1-908230-60-6 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Contents ; Contributors; Preface; Foreword; 1: Functional Assignment of Metagenomic Data: Insights for the Microbial Nitrogen Cycle; Introduction; Microbial nitrogen cycle; Exploring the nitrogen cycle using genomic and metagenomic techniques; Terrestrial nitrogen cycle; Aquatic nitrogen cycle; Future scope; 2: Microbial Metagenomics of Oxygen Minimum Zones; Introduction; Metagenomic insights into OMZ metabolism; Drivers of community structure; Challenges; 3: Interactions between Methane and Nitrogen Cycling: Current Metagenomic Studies and Future Trends; Introduction
Interactions between methane and nitrogen cyclingCurrent metagenomic studies; Future perspective; 4: Quantification of Functional Microbial Nitrogen Cycle Genes in Environmental Samples; Introduction; N cycle; Analysis of N cycle-related functional communities; cPCR and qPCR; Quantification of functional genes using qPCR; 5: Stable Isotope Probing the Nitrogen Cycle: Current Applications and Future Directions; Introduction; Nitrogen uptake is limited in many environments; The utility of molecular approaches; DNA stable isotope probing; 15N-DNA stable isotope probing; Nitrogen fixation Biodegradation and bioremediationInorganic N cycling; Organic nitrogen; The way forward; Metagenomics; Combining 15N-SIP, metagenomic sequencing and flow cytometry; Protein stable isotope probing; Chip stable isotope probing; Conclusions; 6: Application of Metaproteomics to the Exploration of Microbial N-cycling Communities; Introduction; Metaproteomics and the nitrogen cycle; Protein-SIP and the nitrogen cycle; Proteomics of microbial isolates relevant to the nitrogen cycle; Conclusions; Future trends 7: Functional Molecular Analysis of Microbial Nitrogen Cycle by Microarray-based GeoChip: Insights for Climate Change, Agriculture and Other Ecological StudiesIntroduction; Microarray technology and functional gene array; GeoChip technology; GeoChip application in investigating N functional genes; Challenges for GeoChip technology and future directions; 8: Functional and Taxonomic Diversity of the Nitrogen Cycling Guild in the Sargasso Sea Metagenomes; Introduction; Taxonomic diversity of the Sargasso Sea microbial communities; Functional diversity of the N-cycling guild in the Sargasso Sea DiscussionExclusion by filtering; A cautionary tale on ignoring the masses; Future trends; 9: Microbial Nitrogen Cycle: Determination of Microbial Functional Activities and Related N-compounds in Environmental Samples; Introduction; Microbial functional activities of the N-cycle; Determination of some N-compounds relative to the N-cycle; 10: Functional Metagenomics of the Nitrogen Cycle in Freshwater Lakes with Focus on Methylotrophic Bacteria; Introduction; Functional metagenomics uncover the dominant methylotrophs, Methylobacter and Methylotenera, and identify nitrogen metabolism strategies Nitrate supplement causes specific responses by the Methylophilaceae ecotypes |
| Record Nr. | UNINA-9910786653403321 |
| Norfolk, England : , : Caister Academic Press, , [2014] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Metagenomics of the microbial nitrogen cycle : theory, methods and applications / / Edited by Diana Marco
| Metagenomics of the microbial nitrogen cycle : theory, methods and applications / / Edited by Diana Marco |
| Pubbl/distr/stampa | Norfolk, England : , : Caister Academic Press, , [2014] |
| Descrizione fisica | 1 online resource (283 p.) |
| Disciplina | 579.17 |
| Soggetto topico |
Microbial ecology
Nitrogen - Fixation Microbial genomics Nitrogen cycle |
| ISBN | 1-908230-60-6 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Contents ; Contributors; Preface; Foreword; 1: Functional Assignment of Metagenomic Data: Insights for the Microbial Nitrogen Cycle; Introduction; Microbial nitrogen cycle; Exploring the nitrogen cycle using genomic and metagenomic techniques; Terrestrial nitrogen cycle; Aquatic nitrogen cycle; Future scope; 2: Microbial Metagenomics of Oxygen Minimum Zones; Introduction; Metagenomic insights into OMZ metabolism; Drivers of community structure; Challenges; 3: Interactions between Methane and Nitrogen Cycling: Current Metagenomic Studies and Future Trends; Introduction
Interactions between methane and nitrogen cyclingCurrent metagenomic studies; Future perspective; 4: Quantification of Functional Microbial Nitrogen Cycle Genes in Environmental Samples; Introduction; N cycle; Analysis of N cycle-related functional communities; cPCR and qPCR; Quantification of functional genes using qPCR; 5: Stable Isotope Probing the Nitrogen Cycle: Current Applications and Future Directions; Introduction; Nitrogen uptake is limited in many environments; The utility of molecular approaches; DNA stable isotope probing; 15N-DNA stable isotope probing; Nitrogen fixation Biodegradation and bioremediationInorganic N cycling; Organic nitrogen; The way forward; Metagenomics; Combining 15N-SIP, metagenomic sequencing and flow cytometry; Protein stable isotope probing; Chip stable isotope probing; Conclusions; 6: Application of Metaproteomics to the Exploration of Microbial N-cycling Communities; Introduction; Metaproteomics and the nitrogen cycle; Protein-SIP and the nitrogen cycle; Proteomics of microbial isolates relevant to the nitrogen cycle; Conclusions; Future trends 7: Functional Molecular Analysis of Microbial Nitrogen Cycle by Microarray-based GeoChip: Insights for Climate Change, Agriculture and Other Ecological StudiesIntroduction; Microarray technology and functional gene array; GeoChip technology; GeoChip application in investigating N functional genes; Challenges for GeoChip technology and future directions; 8: Functional and Taxonomic Diversity of the Nitrogen Cycling Guild in the Sargasso Sea Metagenomes; Introduction; Taxonomic diversity of the Sargasso Sea microbial communities; Functional diversity of the N-cycling guild in the Sargasso Sea DiscussionExclusion by filtering; A cautionary tale on ignoring the masses; Future trends; 9: Microbial Nitrogen Cycle: Determination of Microbial Functional Activities and Related N-compounds in Environmental Samples; Introduction; Microbial functional activities of the N-cycle; Determination of some N-compounds relative to the N-cycle; 10: Functional Metagenomics of the Nitrogen Cycle in Freshwater Lakes with Focus on Methylotrophic Bacteria; Introduction; Functional metagenomics uncover the dominant methylotrophs, Methylobacter and Methylotenera, and identify nitrogen metabolism strategies Nitrate supplement causes specific responses by the Methylophilaceae ecotypes |
| Record Nr. | UNINA-9910827860103321 |
| Norfolk, England : , : Caister Academic Press, , [2014] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Nitrification [[electronic resource] /] / edited by Bess B. Ward, Daniel J. Arp, Martin G. Klotz
| Nitrification [[electronic resource] /] / edited by Bess B. Ward, Daniel J. Arp, Martin G. Klotz |
| Pubbl/distr/stampa | Washington, D.C., : ASM Press, c2011 |
| Descrizione fisica | 1 online resource (461 p.) |
| Disciplina | 572.545 |
| Altri autori (Persone) |
WardBess B
ArpD. J KlotzMartin G |
| Soggetto topico |
Nitrification
Nitrogen - Fixation |
| ISBN |
1-68367-116-3
1-61344-267-X 1-55581-714-9 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
""Cover""; ""Contents""; ""Contributors""; ""Preface""; ""I: OVERVIEW""; ""1. Nitrification: an Introduction and Overview of the State of the Field""; ""II: AMMONIA-OXIDIZING BACTERIA""; ""2. Ammonia-Oxidizing Bacteria: Their Biochemistry and Molecular Biology""; ""3. Diversity and Environmental Distribution of Ammonia-Oxidizing Bacteria""; ""4. Genomics of Ammonia-Oxidizing Bacteria and Insights into Their Evolution""; ""5. Heterotrophic Nitrification and Nitrifier Denitrification""; ""III: AMMONIA-OXIDIZING ARCHAEA""; ""6. Physiology and Genomics of Ammonia-Oxidizing Archaea""
""7. Distribution and Activity of Ammonia-Oxidizing Archaea in Natural Environments""""IV: ANAEROBIC AMMONIA OXIDATION (ANAMMOX)""; ""8. Metabolism and Genomics of Anammox Bacteria""; ""9. Distribution, Activity, and Ecology of Anammox Bacteria in Aquatic Environments""; ""10. Application of the Anammox Process""; ""V: NITRITE-OXIDIZING BACTERIA""; ""11. Metabolism and Genomics of Nitrite-Oxidizing Bacteria: Emphasis on Studies of Pure Cultures and of Nitrobacter Species""; ""12. Diversity, Environmental Genomics, and Ecophysiology of Nitrite-Oxidizing Bacteria"" ""VI: PROCESSES, ECOLOGY, AND ECOSYSTEMS""""13. Nitrification in the Ocean""; ""14. Soil Nitrifiers and Nitrification""; ""15. Nitrification in Inland Waters""; ""16. Nitrification in Wastewater Treatment""; ""Index""; ""A""; ""B""; ""C""; ""D""; ""E""; ""F""; ""G""; ""H""; ""I""; ""K""; ""L""; ""M""; ""N""; ""O""; ""P""; ""Q""; ""R""; ""S""; ""T""; ""V""; ""W"" |
| Record Nr. | UNINA-9910574098703321 |
| Washington, D.C., : ASM Press, c2011 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
