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Advances in artificial life : 9th European conference, ECAL 2007, Lisbon, Portugal, September 10-14, 2007 : proceedings / / Fernando Almeida e Costa [and four others]
Advances in artificial life : 9th European conference, ECAL 2007, Lisbon, Portugal, September 10-14, 2007 : proceedings / / Fernando Almeida e Costa [and four others]
Edizione [1st ed. 2007.]
Pubbl/distr/stampa Berlin, Germany ; ; New York, New York : , : Springer, , [2007]
Descrizione fisica 1 online resource (XVIII, 1218 p.)
Disciplina 006.3
Collana Lecture Notes in Artificial Intelligence
Soggetto topico Biological systems - Simulation methods
Biological systems - Computer simulation
Robotics
ISBN 1-281-04374-5
9786611043742
3-540-74913-6
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Artificial Chemistries, Pre-biotic Evolution -- Evolution -- Ecosystems -- Morphodynamics, Development -- Adaptive Behavior -- Learning and Evolution -- Communication, Constitution of Meaning, Language -- Agency, Autopoiesis, Autonomy -- Alife and Art -- Dynamics of Social Systems, Collective Behavior -- Swarm and Ant Colony Systems -- Robotics and Autonomous Agents: Concepts and Applications -- Evolutionary Computation -- Networks, Cellular Automata, Complex Systems -- Models and Methodologies.
Record Nr. UNISA-996465327003316
Berlin, Germany ; ; New York, New York : , : Springer, , [2007]
Materiale a stampa
Lo trovi qui: Univ. di Salerno
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Advances in artificial life : 5th European Conference, ECAL'99, Lausanne, Switzerland, September 13-17, 1999 : proceedings / / Dario Floreano, Jean-Daniel Nicoud, Francesco Mondada
Advances in artificial life : 5th European Conference, ECAL'99, Lausanne, Switzerland, September 13-17, 1999 : proceedings / / Dario Floreano, Jean-Daniel Nicoud, Francesco Mondada
Edizione [1st ed. 1999.]
Pubbl/distr/stampa Berlin ; ; Heidelberg : , : Springer, , [1999]
Descrizione fisica 1 online resource (XVIII, 742 p.)
Disciplina 570.113
Collana Lecture Notes in Artificial Intelligence
Soggetto topico Biological systems - Computer simulation
Biological systems - Simulation methods
Robotics
Artificial intelligence
ISBN 3-540-48304-7
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto Keynote Lectures -- Epistemology -- Evolutionary Dynamics -- Evolutionary Cybernetics -- Bio-inspired Robotics and Autonomous Agents -- Self-Replication, Self-Maintenance, and Gene Expression -- Societies and Collective Behaviour -- Communication and Language.
Record Nr. UNISA-996465954103316
Berlin ; ; Heidelberg : , : Springer, , [1999]
Materiale a stampa
Lo trovi qui: Univ. di Salerno
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Artificial life
Artificial life
Pubbl/distr/stampa Cambridge, MA, : MIT Press
Disciplina 570
Soggetto topico Biological systems - Computer simulation
Biological systems - Simulation methods
Artificial Intelligence
Models, Biological
Organelle Biogenesis
Life Sciences
Künstliches Leben
Zeitschrift
Biologie
Kunstmatige intelligentie
Adaptieve regelaars
Soggetto genere / forma Periodicals.
ISSN 1530-9185
Formato Materiale a stampa
Livello bibliografico Periodico
Lingua di pubblicazione eng
Record Nr. UNINA-9910154536203321
Cambridge, MA, : MIT Press
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Computational systems bioinformatics [[electronic resource] ] : CSB2007 Conference proceedings, volume 6, University of California, San Diego, 13-17 August 2007 / / editors, Peter Markstein, Ying Xu
Computational systems bioinformatics [[electronic resource] ] : CSB2007 Conference proceedings, volume 6, University of California, San Diego, 13-17 August 2007 / / editors, Peter Markstein, Ying Xu
Pubbl/distr/stampa London, : Imperial College Press
Descrizione fisica 1 online resource (472 p.)
Disciplina 572.80285
Altri autori (Persone) MarksteinPeter
XuYing <1960->
Collana Series on Advances in Bioinformatics and Computational Biology
Series on advances in bioinformatics and computational biology
Soggetto topico Bioinformatics
Biological systems - Computer simulation
Biological systems - Simulation methods
Computational biology
Soggetto genere / forma Electronic books.
ISBN 1-281-86759-4
9786611867591
1-86094-873-1
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto CONTENTS; Preface; Committees; Referees; Keynote Address; Quantitative Aspects of Gene Regulation in Bacteria: Amplification. Threshold, and Combinatorial Control Terry Hwa; Whole-Genome Analysis of Dorsal Gradient Thresholds in the Drosophila Embryo Julia ZeitlingeK Rob Zinzen, Dmitri Papatsenko et al.; Invited Talks; Learning Predictive Models of Gene Regulation Christina Leslie; The Phylofacts Phylogenomic Encyclopedias: Structural Phylogenomic Analysis Across the Tree of Life Kimmen Golander; Mapping and Analysis of the Human Interactome Network Kavitha Venkatesan; 1. INTRODUCTION
Gene-Centered Protein-DNA lnteractome Mapping A.J. Marian WalhoutProteomics; Algorithm for Peptide Sequencing by Tandem Mass Spectrometry Based on Better Preprocessing and Anti-S ymmetric Computational Model Kang Ning and Hon Wai Leong; 1. INTRODUCTION; Preprocessing to remove noisy peaks; The anti-symmetric problem; 2. ANALYSIS OF PROBLEMS AND CURRENT ALGORITHMS; 2.1. General Terminologies; 2.2. Datasets; 2.3. Problems Analysis; 3. NEW COMPUTATIONAL MODELS AND ALGORITHM; 3.1. Preprocessing to remove noisy peaks and introduce pseudo peaks; 3.2. The Anti-symmetric Problem
3.3. Novel Peptide Sequencing Algorithm4. EXPERIMENTS; 4.1. Experiment Settings; 4.2. Results; 5. CONCLUSIONS; References; Algorithms for Selecting Breakpoint Locations to Optimize Diversity in Protein Engineering by Site-Directed Protein Recombination Wei Zheng, Xiaoduan Ye, Alan A4 Friedman and Chris Bailey-Kellogg; 1. INTRODUCTION; 2. METHODS; 2.1. Library Diversity; 2.2. Metrics for Breakpoint Selection; 2.3. Dynamic Programming for Breakpoint Selection; 3. RESULTS A N D DISCUSSION; 4. CONCLUSION; ACKNOWLEDGMENTS; References
An Algorithmic Approach to Automated High-Throughput Identification of Disulfide Connectivity in Proteins Using Tandem Mass Spectrometry Timothy Lee, Rahul Singh, Ten-Yang Yen and Bruce Macher1. INTRODUCTION; 1.1. Comparison of the Proposed Approach with Related Works; 2. THE PROPOSED METHOD; 2.1. Problem Formulation; 2.2. Algorithmic Framework; 2.2.1. Finding the MS spectrum match; 2.2.2. Finding the MS/MS spectrum match; 2.2.3. Finding a perfect matching of maximum weight for a fully connected graph; 2.2.4. Consideration of missed proteolytic cleavages and intra-molecular bonded cysteines
2.2.5. Peak finding in the presence of noise2.2.6. Addressing isotopic variation and neutral loss; 2.2.7. Interpretation of peaks given charge state uncertainty; 2.2.8. Overall complexity; 3. EXPERIMENTAL RESULTS; 3.1. Description of the Data and Experimental Procedures; 3.2. Summary of Results; 3.2.1. Analysis of the effect of varying threshold t on results; 3.2.2. Comparison with MS2Assign program; 4. CONCLUSIONS AND DISCUSSION; Acknowledgments; References; Biomedical Application; Cancer Molecular Pattern Discovery by Subspace Consensus Kernel Classification Xiaoxu Hun; 1. INTRODUCTION
1 .1. Nonnegative matrix factorization
Record Nr. UNINA-9910451116403321
London, : Imperial College Press
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Computational systems bioinformatics [[electronic resource] ] : CSB2007 Conference proceedings, volume 6, University of California, San Diego, 13-17 August 2007 / / editors, Peter Markstein, Ying Xu
Computational systems bioinformatics [[electronic resource] ] : CSB2007 Conference proceedings, volume 6, University of California, San Diego, 13-17 August 2007 / / editors, Peter Markstein, Ying Xu
Pubbl/distr/stampa London, : Imperial College Press
Descrizione fisica 1 online resource (472 p.)
Disciplina 572.80285
Altri autori (Persone) MarksteinPeter
XuYing <1960->
Collana Series on Advances in Bioinformatics and Computational Biology
Series on advances in bioinformatics and computational biology
Soggetto topico Bioinformatics
Biological systems - Computer simulation
Biological systems - Simulation methods
Computational biology
ISBN 1-281-86759-4
9786611867591
1-86094-873-1
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto CONTENTS; Preface; Committees; Referees; Keynote Address; Quantitative Aspects of Gene Regulation in Bacteria: Amplification. Threshold, and Combinatorial Control Terry Hwa; Whole-Genome Analysis of Dorsal Gradient Thresholds in the Drosophila Embryo Julia ZeitlingeK Rob Zinzen, Dmitri Papatsenko et al.; Invited Talks; Learning Predictive Models of Gene Regulation Christina Leslie; The Phylofacts Phylogenomic Encyclopedias: Structural Phylogenomic Analysis Across the Tree of Life Kimmen Golander; Mapping and Analysis of the Human Interactome Network Kavitha Venkatesan; 1. INTRODUCTION
Gene-Centered Protein-DNA lnteractome Mapping A.J. Marian WalhoutProteomics; Algorithm for Peptide Sequencing by Tandem Mass Spectrometry Based on Better Preprocessing and Anti-S ymmetric Computational Model Kang Ning and Hon Wai Leong; 1. INTRODUCTION; Preprocessing to remove noisy peaks; The anti-symmetric problem; 2. ANALYSIS OF PROBLEMS AND CURRENT ALGORITHMS; 2.1. General Terminologies; 2.2. Datasets; 2.3. Problems Analysis; 3. NEW COMPUTATIONAL MODELS AND ALGORITHM; 3.1. Preprocessing to remove noisy peaks and introduce pseudo peaks; 3.2. The Anti-symmetric Problem
3.3. Novel Peptide Sequencing Algorithm4. EXPERIMENTS; 4.1. Experiment Settings; 4.2. Results; 5. CONCLUSIONS; References; Algorithms for Selecting Breakpoint Locations to Optimize Diversity in Protein Engineering by Site-Directed Protein Recombination Wei Zheng, Xiaoduan Ye, Alan A4 Friedman and Chris Bailey-Kellogg; 1. INTRODUCTION; 2. METHODS; 2.1. Library Diversity; 2.2. Metrics for Breakpoint Selection; 2.3. Dynamic Programming for Breakpoint Selection; 3. RESULTS A N D DISCUSSION; 4. CONCLUSION; ACKNOWLEDGMENTS; References
An Algorithmic Approach to Automated High-Throughput Identification of Disulfide Connectivity in Proteins Using Tandem Mass Spectrometry Timothy Lee, Rahul Singh, Ten-Yang Yen and Bruce Macher1. INTRODUCTION; 1.1. Comparison of the Proposed Approach with Related Works; 2. THE PROPOSED METHOD; 2.1. Problem Formulation; 2.2. Algorithmic Framework; 2.2.1. Finding the MS spectrum match; 2.2.2. Finding the MS/MS spectrum match; 2.2.3. Finding a perfect matching of maximum weight for a fully connected graph; 2.2.4. Consideration of missed proteolytic cleavages and intra-molecular bonded cysteines
2.2.5. Peak finding in the presence of noise2.2.6. Addressing isotopic variation and neutral loss; 2.2.7. Interpretation of peaks given charge state uncertainty; 2.2.8. Overall complexity; 3. EXPERIMENTAL RESULTS; 3.1. Description of the Data and Experimental Procedures; 3.2. Summary of Results; 3.2.1. Analysis of the effect of varying threshold t on results; 3.2.2. Comparison with MS2Assign program; 4. CONCLUSIONS AND DISCUSSION; Acknowledgments; References; Biomedical Application; Cancer Molecular Pattern Discovery by Subspace Consensus Kernel Classification Xiaoxu Hun; 1. INTRODUCTION
1 .1. Nonnegative matrix factorization
Record Nr. UNINA-9910784980403321
London, : Imperial College Press
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Computational systems bioinformatics : CSB2007 Conference proceedings, volume 6, University of California, San Diego, 13-17 August 2007 / / editors, Peter Markstein, Ying Xu
Computational systems bioinformatics : CSB2007 Conference proceedings, volume 6, University of California, San Diego, 13-17 August 2007 / / editors, Peter Markstein, Ying Xu
Edizione [1st ed.]
Pubbl/distr/stampa London, : Imperial College Press
Descrizione fisica 1 online resource (472 p.)
Disciplina 572.80285
Altri autori (Persone) MarksteinPeter
XuYing <1960->
Collana Series on Advances in Bioinformatics and Computational Biology
Series on advances in bioinformatics and computational biology
Soggetto topico Bioinformatics
Biological systems - Computer simulation
Biological systems - Simulation methods
Computational biology
ISBN 9786611867591
9781281867599
1281867594
9781860948732
1860948731
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto CONTENTS; Preface; Committees; Referees; Keynote Address; Quantitative Aspects of Gene Regulation in Bacteria: Amplification. Threshold, and Combinatorial Control Terry Hwa; Whole-Genome Analysis of Dorsal Gradient Thresholds in the Drosophila Embryo Julia ZeitlingeK Rob Zinzen, Dmitri Papatsenko et al.; Invited Talks; Learning Predictive Models of Gene Regulation Christina Leslie; The Phylofacts Phylogenomic Encyclopedias: Structural Phylogenomic Analysis Across the Tree of Life Kimmen Golander; Mapping and Analysis of the Human Interactome Network Kavitha Venkatesan; 1. INTRODUCTION
Gene-Centered Protein-DNA lnteractome Mapping A.J. Marian WalhoutProteomics; Algorithm for Peptide Sequencing by Tandem Mass Spectrometry Based on Better Preprocessing and Anti-S ymmetric Computational Model Kang Ning and Hon Wai Leong; 1. INTRODUCTION; Preprocessing to remove noisy peaks; The anti-symmetric problem; 2. ANALYSIS OF PROBLEMS AND CURRENT ALGORITHMS; 2.1. General Terminologies; 2.2. Datasets; 2.3. Problems Analysis; 3. NEW COMPUTATIONAL MODELS AND ALGORITHM; 3.1. Preprocessing to remove noisy peaks and introduce pseudo peaks; 3.2. The Anti-symmetric Problem
3.3. Novel Peptide Sequencing Algorithm4. EXPERIMENTS; 4.1. Experiment Settings; 4.2. Results; 5. CONCLUSIONS; References; Algorithms for Selecting Breakpoint Locations to Optimize Diversity in Protein Engineering by Site-Directed Protein Recombination Wei Zheng, Xiaoduan Ye, Alan A4 Friedman and Chris Bailey-Kellogg; 1. INTRODUCTION; 2. METHODS; 2.1. Library Diversity; 2.2. Metrics for Breakpoint Selection; 2.3. Dynamic Programming for Breakpoint Selection; 3. RESULTS A N D DISCUSSION; 4. CONCLUSION; ACKNOWLEDGMENTS; References
An Algorithmic Approach to Automated High-Throughput Identification of Disulfide Connectivity in Proteins Using Tandem Mass Spectrometry Timothy Lee, Rahul Singh, Ten-Yang Yen and Bruce Macher1. INTRODUCTION; 1.1. Comparison of the Proposed Approach with Related Works; 2. THE PROPOSED METHOD; 2.1. Problem Formulation; 2.2. Algorithmic Framework; 2.2.1. Finding the MS spectrum match; 2.2.2. Finding the MS/MS spectrum match; 2.2.3. Finding a perfect matching of maximum weight for a fully connected graph; 2.2.4. Consideration of missed proteolytic cleavages and intra-molecular bonded cysteines
2.2.5. Peak finding in the presence of noise2.2.6. Addressing isotopic variation and neutral loss; 2.2.7. Interpretation of peaks given charge state uncertainty; 2.2.8. Overall complexity; 3. EXPERIMENTAL RESULTS; 3.1. Description of the Data and Experimental Procedures; 3.2. Summary of Results; 3.2.1. Analysis of the effect of varying threshold t on results; 3.2.2. Comparison with MS2Assign program; 4. CONCLUSIONS AND DISCUSSION; Acknowledgments; References; Biomedical Application; Cancer Molecular Pattern Discovery by Subspace Consensus Kernel Classification Xiaoxu Hun; 1. INTRODUCTION
1 .1. Nonnegative matrix factorization
Altri titoli varianti CSB 2007 Conference proceedings
CSB2007 Conference proceedings
Record Nr. UNINA-9910958240803321
London, : Imperial College Press
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Computational systems bioinformatics [[electronic resource] ] : CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 / / editors, Peter Markstein, Ying Xu
Computational systems bioinformatics [[electronic resource] ] : CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 / / editors, Peter Markstein, Ying Xu
Pubbl/distr/stampa London, : Imperial College Press, c2006
Descrizione fisica 1 online resource (416 p.)
Disciplina 572.80285
Altri autori (Persone) MarksteinPeter
XuYing <1960->
Collana Series on advances in bioinformatics and computational biology
Soggetto topico Bioinformatics
Computational biology
Biological systems - Computer simulation
Biological systems - Simulation methods
Soggetto genere / forma Electronic books.
ISBN 1-281-86737-3
9786611867379
1-86094-757-3
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto CONTENTS ; Committees ; Referees ; Preface ; Keynote Addresses ; Exploring the Ocean's Microbes: Sequencing the Seven Seas ; Don't Know Much About Philosophy: The Confusion Over Bio-Ontologies ; Invited Talks
Biomedical Informatics Research Network (BIRN): Building a National Collaboratory for BioMedical and Brain Research Protein Network Comparative Genomics ; Systems Biology in Two Dimensions: Understanding and Engineering Membranes as Dynamical Systems ; Bioinformatics at Microsoft Research
Movie Crunching in Biological Dynamic Imaging Engineering Nucleic Acid-Based Molecular Sensors for Probing and Programming Cellular Systems ; Reactome: A Knowledgebase of Biological Pathways ; Structural Bioinformatics
Effective Optimization Algorithms for Fragment-Assembly based Protein Structure Prediction Transmembrane Helix and Topology Prediction Using Hierarchical SVM Classifiers and an Alternating Geometric Scoring Function ; Protein Fold Recognition Using the Gradient Boost Algorithm
A Graph-Based Automated NMR Backbone Resonance Sequential Assignment A Data-Driven Systematic Search Algorithm for Structure Determination of Denatured or Disordered Proteins ; Multiple Structure Alignment by Optimal RMSD Implies that the Average Structure is a Consensus
Identification of a-Helices from Low Resolution Protein Density Maps
Record Nr. UNINA-9910451319503321
London, : Imperial College Press, c2006
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Computational systems bioinformatics [[electronic resource] ] : CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 / / editors, Peter Markstein, Ying Xu
Computational systems bioinformatics [[electronic resource] ] : CSB2006 conference proceedings, Stanford CA, 14-18 August 2006 / / editors, Peter Markstein, Ying Xu
Pubbl/distr/stampa London, : Imperial College Press, c2006
Descrizione fisica 1 online resource (416 p.)
Disciplina 572.80285
Altri autori (Persone) MarksteinPeter
XuYing <1960->
Collana Series on advances in bioinformatics and computational biology
Soggetto topico Bioinformatics
Computational biology
Biological systems - Computer simulation
Biological systems - Simulation methods
ISBN 1-281-86737-3
9786611867379
1-86094-757-3
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto CONTENTS ; Committees ; Referees ; Preface ; Keynote Addresses ; Exploring the Ocean's Microbes: Sequencing the Seven Seas ; Don't Know Much About Philosophy: The Confusion Over Bio-Ontologies ; Invited Talks
Biomedical Informatics Research Network (BIRN): Building a National Collaboratory for BioMedical and Brain Research Protein Network Comparative Genomics ; Systems Biology in Two Dimensions: Understanding and Engineering Membranes as Dynamical Systems ; Bioinformatics at Microsoft Research
Movie Crunching in Biological Dynamic Imaging Engineering Nucleic Acid-Based Molecular Sensors for Probing and Programming Cellular Systems ; Reactome: A Knowledgebase of Biological Pathways ; Structural Bioinformatics
Effective Optimization Algorithms for Fragment-Assembly based Protein Structure Prediction Transmembrane Helix and Topology Prediction Using Hierarchical SVM Classifiers and an Alternating Geometric Scoring Function ; Protein Fold Recognition Using the Gradient Boost Algorithm
A Graph-Based Automated NMR Backbone Resonance Sequential Assignment A Data-Driven Systematic Search Algorithm for Structure Determination of Denatured or Disordered Proteins ; Multiple Structure Alignment by Optimal RMSD Implies that the Average Structure is a Consensus
Identification of a-Helices from Low Resolution Protein Density Maps
Record Nr. UNINA-9910784998003321
London, : Imperial College Press, c2006
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Life system modeling and simulation : international conference on life system modeling, and simulation, lsms 2007, Shanghai, China, september 14-17, 2007. Proceedings / / edited by Kang Li, 4 others
Life system modeling and simulation : international conference on life system modeling, and simulation, lsms 2007, Shanghai, China, september 14-17, 2007. Proceedings / / edited by Kang Li, 4 others
Edizione [1st ed. 2007.]
Pubbl/distr/stampa Berlin, Germany ; ; New York, United States : , : Springer, , [2007]
Descrizione fisica 1 online resource (XX, 288 p.)
Disciplina 570.285
Collana Lecture notes in computer science. Lecture notes in bioinformatics, 4689
Soggetto topico Bioinformatics
Biological systems - Simulation methods
Computational intelligence
Biological models
Computational biology
ISBN 3-540-74771-0
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto The First Section: Modeling and Simulation of Societies and Collective Behavior -- The Second Section: Computational Methods and Intelligence in Biomechanical Systems, Tissue Engineering and Clinical Bioengineering -- The Third Section: Computational Intelligence in Bioinformatics and Biometrics -- The Fourth Section: Brain Stimulation, Neural Dynamics and Neural Interfacing -- The Fifth Section: Biological and Biomedical Data Integration, Mining and Visualization -- The Sixth Section: Computational Methods and Intelligence in Organism Modeling and Biochemical Networks and Regulation -- The Seventh Section: Computational Methods and Intelligence in Modeling of Molecular, Cellular, Multi-cellular Behavior and Design of Synthetic Biological Systems -- The Eighth Section: Others.
Altri titoli varianti LSMS 2007
Record Nr. UNISA-996465604603316
Berlin, Germany ; ; New York, United States : , : Springer, , [2007]
Materiale a stampa
Lo trovi qui: Univ. di Salerno
Opac: Controlla la disponibilità qui