Aquaculture genome technologies [[electronic resource] /] / Zhanjiang (John) Liu [editor] |
Edizione | [1st ed.] |
Pubbl/distr/stampa | Ames, Iowa, : Blackwell Pub., 2007 |
Descrizione fisica | 1 online resource (579 p.) |
Disciplina |
572.8/6
572.86 |
Altri autori (Persone) | LiuZhanjiang |
Soggetto topico |
Genomics
Aquatic germplasm resources Aquaculture |
ISBN |
1-282-36513-4
9786612365133 0-470-27756-4 0-470-27633-9 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Concept of genomes and genomics / Zhanjiang Liu -- Restriction fragment length polymorphism (RFLP) / Zhanjiang Liu -- Randomly amplified polymorphic DNA (RAPD) / Zhanjiang Liu -- Amplified fragment length polymorphism (AFLP) / Zhanjiang Liu -- Microsatellite markers and assessment of marker utility / Zhanjiang Liu -- Single nucleotide polymorphism (SNP) / Zhanjiang Liu -- Allozyme and mitochondrial DNA markers / Huseyin Kucuktas and Zhanjiang Liu -- Individual-based genotype methods in aquaculture / Pierre Duchesne and Louis Bernatchez -- Application of DNA markers for population genetic analysis / Eric M. Hallerman, Paul J. Grobler, and Jess W. Jones -- Linkage mapping in aquaculture species / Roy G. Danzmann and Karim Gharbi -- Detection and analysis of quantitative trait loci (QTL) for economic traits in aquatic species / Abraham Korol ... [et al.] -- Marker-assisted selection for aquaculture species / Max F. Rothschild and Anatoly Ruvinsky -- Construction of large-insert bacterial clone libraries and their applications / Limei He ... [et al.] -- Bacterial artificial chromosome libraries and BAC-based physical mapping of aquaculture genomes / William S. Davidson -- Physical characterization of genomes through BAC end sequencing / Peng Xu, Shaolin Wang, and Zhanjiang Liu -- Genomescape: characterizing the repeat structure of the genome / Zhanjiang Liu -- Genomic analyses using fluorescence in situ hybridization / Ximing Guo, Yongping Wang, and Zhe Xu -- Radiation hybrid mapping in aquatic species / Caird E. Rexroad III -- Comparative genomics and positional cloning / Bo-Young Lee and Thomas D. Kocher -- Transcriptome characterization through the analysis of expressed sequence tags / Zhanjiang Liu -- Microarray fundamentals: basic principles and application in aquaculture / Eric Peatman and Zhanjiang Liu -- Salmonid DNA microarrays and other tools for functional genomics research / Matthew L. Rise ... [et al.] -- Computational challenges for the analysis of large datasets related to aquatic environmental genomics / Gregory W. Warr, Jonas S. Almeida, and Robert W. Chapman -- Functional genomics / Perry B. Hackett and Karl J. Clark -- DNA sequencing technologies / Zhanjiang Liu -- Sequencing the genome / Zhanjiang Liu -- Bioinformatics / Lei Liu -- Dealing with duplicated genomes of teleosts / Alan Christoffels -- Bivalve genomics: complications, challenges, and future perspectives / Jason P. Curole and Dennis Hedgecock. |
Record Nr. | UNISA-996206186703316 |
Ames, Iowa, : Blackwell Pub., 2007 | ||
![]() | ||
Lo trovi qui: Univ. di Salerno | ||
|
Bioinformatics and Functional Genomics |
Autore | Pevsner Jonathan |
Edizione | [3rd ed.] |
Pubbl/distr/stampa | Hoboken : , : John Wiley & Sons, Incorporated, , 2015 |
Descrizione fisica | 1 online resource (1161 pages) |
Disciplina | 572.8/6 |
Soggetto topico |
Bioinformatics
Genomics -- Data processing Molecular biology -- Data processing |
Soggetto genere / forma | Electronic books. |
ISBN |
9781118581766
9781118581780 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Cover -- Title Page -- Copyright Page -- Contents in Brief -- Contents -- Preface to the Third Edition -- About the Companion Website -- Part I Analyzing DNA, RNA, and Protein Sequences -- 1 Introduction -- 2 Access to Sequence Data and Related Information -- 3 Pairwise Sequence Alignment -- 4 Basic Local Alignment Search Tool (BLAST) -- 5 Advanced Database Searching -- 6 Multiple Sequence Alignment -- 7 Molecular Phylogeny and Evolution -- Part II Genomewide Analysis of DNA, RNA, and Protein -- 8 DNA: The Eukaryotic Chromosome -- 9 Analysis of Next-Generation Sequence Data -- 10 Bioinformatic Approaches to Ribonucleic Acid (RNA) -- 11 Gene Expression: Microarray and RNA-seq Data Analysis -- 12 Protein Analysis and Proteomics -- 13 Protein Structure -- 14 Functional Genomics -- Part III Genome Analysis -- 15 Genomes Across the Tree of Life -- 16 Completed Genomes: Viruses -- 17 Completed Genomes: Bacteria and Archaea -- 18 Eukaryotic Genomes: Fungi -- 19 Eukaryotic Genomes: From Parasites to Primates -- 20 Human Genome -- 21 Human Disease -- Glossary -- Self-Test Quiz: Solutions -- Author Index -- Subject Index -- Wiley End User License Agreement. |
Record Nr. | UNINA-9910795829703321 |
Pevsner Jonathan
![]() |
||
Hoboken : , : John Wiley & Sons, Incorporated, , 2015 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
Bioinformatics and Functional Genomics |
Autore | Pevsner Jonathan |
Edizione | [3rd ed.] |
Pubbl/distr/stampa | Hoboken : , : John Wiley & Sons, Incorporated, , 2015 |
Descrizione fisica | 1 online resource (1161 pages) |
Disciplina | 572.8/6 |
Soggetto topico |
Bioinformatics
Genomics -- Data processing Molecular biology -- Data processing |
Soggetto genere / forma | Electronic books. |
ISBN |
9781118581766
9781118581780 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Cover -- Title Page -- Copyright Page -- Contents in Brief -- Contents -- Preface to the Third Edition -- About the Companion Website -- Part I Analyzing DNA, RNA, and Protein Sequences -- 1 Introduction -- 2 Access to Sequence Data and Related Information -- 3 Pairwise Sequence Alignment -- 4 Basic Local Alignment Search Tool (BLAST) -- 5 Advanced Database Searching -- 6 Multiple Sequence Alignment -- 7 Molecular Phylogeny and Evolution -- Part II Genomewide Analysis of DNA, RNA, and Protein -- 8 DNA: The Eukaryotic Chromosome -- 9 Analysis of Next-Generation Sequence Data -- 10 Bioinformatic Approaches to Ribonucleic Acid (RNA) -- 11 Gene Expression: Microarray and RNA-seq Data Analysis -- 12 Protein Analysis and Proteomics -- 13 Protein Structure -- 14 Functional Genomics -- Part III Genome Analysis -- 15 Genomes Across the Tree of Life -- 16 Completed Genomes: Viruses -- 17 Completed Genomes: Bacteria and Archaea -- 18 Eukaryotic Genomes: Fungi -- 19 Eukaryotic Genomes: From Parasites to Primates -- 20 Human Genome -- 21 Human Disease -- Glossary -- Self-Test Quiz: Solutions -- Author Index -- Subject Index -- Wiley End User License Agreement. |
Record Nr. | UNINA-9910808997603321 |
Pevsner Jonathan
![]() |
||
Hoboken : , : John Wiley & Sons, Incorporated, , 2015 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
Bioinformatics and functional genomics / / Jonathan Pevsner |
Autore | Pevsner Jonathan <1961-> |
Edizione | [2nd ed.] |
Pubbl/distr/stampa | Hoboken, N.J., : Wiley-Blackwell, c2009 |
Descrizione fisica | 1 online resource (990 p.) |
Disciplina |
572.0285
572.8/6 572.86 |
Soggetto topico |
Genomics
Bioinformatics Proteomics |
ISBN |
1-118-68841-4
1-282-13736-0 9786612137365 0-470-45149-1 0-470-45148-3 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Access to sequence data and literature information -- Pairwise sequence alignment -- Basic local alignment search tool (BLAST) -- Advanced database searching -- Multiple sequence alignment -- Molecular phylogeny and evolution -- Bioinformatic approaches to ribonucleic acid (RNA) -- Gene expression : microarray data analysis -- Protein analysis and proteomics -- Protein structure -- Functional genomics -- Completed genomes -- Completed genomes : viruses -- Completed genomes : bacteria and archaea -- The eukaryotic chromosome -- Eukaryotic genomes : fungi -- Eukaryotic genomes : from parasites to primates -- Human genome -- Human disease. |
Record Nr. | UNINA-9910146409603321 |
Pevsner Jonathan <1961->
![]() |
||
Hoboken, N.J., : Wiley-Blackwell, c2009 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
Comparative Genomics / / by Xuhua Xia |
Autore | Xia Xuhua <1959-> |
Edizione | [1st ed. 2013.] |
Pubbl/distr/stampa | Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2013 |
Descrizione fisica | 1 online resource (77 p.) |
Disciplina |
572.8/6
572.86 |
Collana | SpringerBriefs in Genetics |
Soggetto topico |
Evolutionary biology
Molecular ecology Biomathematics Microbial genetics Microbial genomics Animal genetics Evolutionary Biology Molecular Ecology Mathematical and Computational Biology Microbial Genetics and Genomics Animal Genetics and Genomics |
ISBN | 3-642-37146-9 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Preface -- Acknowledgments -- Chapter 1.What is Comparative Genomics? -- Chapter 2.Comparative Genomics and the Comparative Methods -- Chapter 3.Comparative Viral Genomics: Detecting Recombination -- Index. |
Record Nr. | UNINA-9910437828003321 |
Xia Xuhua <1959->
![]() |
||
Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2013 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
Comparative Genomics [[electronic resource] ] : RECOMB 2005 International Workshop, RCG 2005, Dublin, Ireland, September 18-20, 2005, Proceedings / / edited by Aoife McLysaght, Daniel H. Huson |
Edizione | [1st ed. 2005.] |
Pubbl/distr/stampa | Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2005 |
Descrizione fisica | 1 online resource (VIII, 168 p.) |
Disciplina | 572.8/6 |
Collana | Lecture Notes in Bioinformatics |
Soggetto topico |
Biochemistry
Algorithms Data structures (Computer science) Computer science—Mathematics Database management Bioinformatics Biochemistry, general Algorithm Analysis and Problem Complexity Data Structures Discrete Mathematics in Computer Science Database Management |
ISBN | 3-540-31814-3 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Lower Bounds for Maximum Parsimony with Gene Order Data -- Genes Order and Phylogenetic Reconstruction: Application to ?-Proteobacteria -- Maximizing Synteny Blocks to Identify Ancestral Homologs -- An Expectation-Maximization Algorithm for Analysis of Evolution of Exon-Intron Structure of Eukaryotic Genes -- Likely Scenarios of Intron Evolution -- OMA, A Comprehensive, Automated Project for the Identification of Orthologs from Complete Genome Data: Introduction and First Achievements -- The Incompatible Desiderata of Gene Cluster Properties -- The String Barcoding Problem is NP-Hard -- A Partial Solution to the C-Value Paradox -- Individual Gene Cluster Statistics in Noisy Maps -- Power Boosts for Cluster Tests -- Reversals of Fortune -- Very Low Power to Detect Asymmetric Divergence of Duplicated Genes -- A Framework for Orthology Assignment from Gene Rearrangement Data. |
Record Nr. | UNISA-996465622003316 |
Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2005 | ||
![]() | ||
Lo trovi qui: Univ. di Salerno | ||
|
Comparative Genomics : RECOMB 2005 International Workshop, RCG 2005, Dublin, Ireland, September 18-20, 2005, Proceedings / / edited by Aoife McLysaght, Daniel H. Huson |
Edizione | [1st ed. 2005.] |
Pubbl/distr/stampa | Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2005 |
Descrizione fisica | 1 online resource (VIII, 168 p.) |
Disciplina | 572.8/6 |
Collana | Lecture Notes in Bioinformatics |
Soggetto topico |
Biochemistry
Algorithms Data structures (Computer science) Computer science—Mathematics Database management Bioinformatics Biochemistry, general Algorithm Analysis and Problem Complexity Data Structures Discrete Mathematics in Computer Science Database Management |
ISBN | 3-540-31814-3 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto | Lower Bounds for Maximum Parsimony with Gene Order Data -- Genes Order and Phylogenetic Reconstruction: Application to ?-Proteobacteria -- Maximizing Synteny Blocks to Identify Ancestral Homologs -- An Expectation-Maximization Algorithm for Analysis of Evolution of Exon-Intron Structure of Eukaryotic Genes -- Likely Scenarios of Intron Evolution -- OMA, A Comprehensive, Automated Project for the Identification of Orthologs from Complete Genome Data: Introduction and First Achievements -- The Incompatible Desiderata of Gene Cluster Properties -- The String Barcoding Problem is NP-Hard -- A Partial Solution to the C-Value Paradox -- Individual Gene Cluster Statistics in Noisy Maps -- Power Boosts for Cluster Tests -- Reversals of Fortune -- Very Low Power to Detect Asymmetric Divergence of Duplicated Genes -- A Framework for Orthology Assignment from Gene Rearrangement Data. |
Record Nr. | UNINA-9910483836403321 |
Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2005 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
Data analysis and visualization in genomics and proteomics [[electronic resource] /] / editors, Francisco Azuaje and Joaquín Dopazo |
Pubbl/distr/stampa | Hoboken, NJ, : John Wiley, c2005 |
Descrizione fisica | 1 online resource (285 p.) |
Disciplina |
372.860285
572.8/6 |
Altri autori (Persone) |
AzuajeFrancisco
DopazoJoaquín |
Soggetto topico |
Genomics - Data processing
Proteomics - Data processing Data mining |
Soggetto genere / forma | Electronic books. |
ISBN |
1-280-27600-2
9786610276004 0-470-09441-9 0-470-09440-0 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto |
Data Analysis and Visualization in Genomics and Proteomics; Contents; Preface; List of Contributors; SECTION I INTRODUCTION - DATA DIVERSITY AND INTEGRATION; 1 Integrative Data Analysis and Visualization: Introduction to Critical Problems, Goals and Challenges; 1.1 Data Analysis and Visualization: An Integrative Approach; 1.2 Critical Design and Implementation Factors; 1.3 Overview of Contributions; References; 2 Biological Databases: Infrastructure, Content and Integration; 2.1 Introduction; 2.2 Data Integration; 2.3 Review of Molecular Biology Databases; 2.4 Conclusion; References
3 Data and Predictive Model Integration: an Overview of Key Concepts, Problems and Solutions3.1 Integrative Data Analysis and Visualization: Motivation and Approaches; 3.2 Integrating Informational Views and Complexity for Understanding Function; 3.3 Integrating Data Analysis Techniques for Supporting Functional Analysis; 3.4 Final Remarks; References; SECTION II INTEGRATIVE DATA MINING AND VISUALIZATION - EMPHASIS ON COMBINATION OF MULTIPLE DATA TYPES; 4 Applications of Text Mining in Molecular Biology, from Name Recognition to Protein Interaction Maps; 4.1 Introduction 4.2 Introduction to Text Mining and NLP4.3 Databases and Resources for Biomedical Text Mining; 4.4 Text Mining and Protein-Protein Interactions; 4.5 Other Text-Mining Applications in Genomics; 4.6 The Future of NLP in Biomedicine; Acknowledgements; References; 5 Protein Interaction Prediction by Integrating Genomic Features and Protein Interaction Network Analysis; 5.1 Introduction; 5.2 Genomic Features in Protein Interaction Predictions; 5.3 Machine Learning on Protein-Protein Interactions; 5.4 The Missing Value Problem; 5.5 Network Analysis of Protein Interactions; 5.6 Discussion References6 Integration of Genomic and Phenotypic Data; 6.1 Phenotype; 6.2 Forward Genetics and QTL Analysis; 6.3 Reverse Genetics; 6.4 Prediction of Phenotype from Other Sources of Data; 6.5 Integrating Phenotype Data with Systems Biology; 6.6 Integration of Phenotype Data in Databases; 6.7 Conclusions; References; 7 Ontologies and Functional Genomics; 7.1 Information Mining in Genome-Wide Functional Analysis; 7.2 Sources of Information: Free Text Versus Curated Repositories; 7.3 Bio-Ontologies and the Gene Ontology in Functional Genomics 7.4 Using GO to Translate the Results of Functional Genomic Experiments into Biological Knowledge7.5 Statistical Approaches to Test Significant Biological Differences; 7.6 Using FatiGO to Find Significant Functional Associations in Clusters of Genes; 7.7 Other Tools; 7.8 Examples of Functional Analysis of Clusters of Genes; 7.9 Future Prospects; References; 8 The C. elegans Interactome: its Generation and Visualization; 8.1 Introduction; 8.2 The ORFeome: the first step toward the interactome of C. elegans 8.3 Large-Scale High-Throughput Yeast Two-Hybrid Screens to Map the C. elegans Protein-Protein Interaction (Interactome) Network: Technical Aspects |
Record Nr. | UNINA-9910143713103321 |
Hoboken, NJ, : John Wiley, c2005 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
Data analysis and visualization in genomics and proteomics [[electronic resource] /] / editors, Francisco Azuaje and Joaquín Dopazo |
Pubbl/distr/stampa | Hoboken, NJ, : John Wiley, c2005 |
Descrizione fisica | 1 online resource (285 p.) |
Disciplina |
372.860285
572.8/6 |
Altri autori (Persone) |
AzuajeFrancisco
DopazoJoaquín |
Soggetto topico |
Genomics - Data processing
Proteomics - Data processing Data mining |
ISBN |
1-280-27600-2
9786610276004 0-470-09441-9 0-470-09440-0 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Nota di contenuto |
Data Analysis and Visualization in Genomics and Proteomics; Contents; Preface; List of Contributors; SECTION I INTRODUCTION - DATA DIVERSITY AND INTEGRATION; 1 Integrative Data Analysis and Visualization: Introduction to Critical Problems, Goals and Challenges; 1.1 Data Analysis and Visualization: An Integrative Approach; 1.2 Critical Design and Implementation Factors; 1.3 Overview of Contributions; References; 2 Biological Databases: Infrastructure, Content and Integration; 2.1 Introduction; 2.2 Data Integration; 2.3 Review of Molecular Biology Databases; 2.4 Conclusion; References
3 Data and Predictive Model Integration: an Overview of Key Concepts, Problems and Solutions3.1 Integrative Data Analysis and Visualization: Motivation and Approaches; 3.2 Integrating Informational Views and Complexity for Understanding Function; 3.3 Integrating Data Analysis Techniques for Supporting Functional Analysis; 3.4 Final Remarks; References; SECTION II INTEGRATIVE DATA MINING AND VISUALIZATION - EMPHASIS ON COMBINATION OF MULTIPLE DATA TYPES; 4 Applications of Text Mining in Molecular Biology, from Name Recognition to Protein Interaction Maps; 4.1 Introduction 4.2 Introduction to Text Mining and NLP4.3 Databases and Resources for Biomedical Text Mining; 4.4 Text Mining and Protein-Protein Interactions; 4.5 Other Text-Mining Applications in Genomics; 4.6 The Future of NLP in Biomedicine; Acknowledgements; References; 5 Protein Interaction Prediction by Integrating Genomic Features and Protein Interaction Network Analysis; 5.1 Introduction; 5.2 Genomic Features in Protein Interaction Predictions; 5.3 Machine Learning on Protein-Protein Interactions; 5.4 The Missing Value Problem; 5.5 Network Analysis of Protein Interactions; 5.6 Discussion References6 Integration of Genomic and Phenotypic Data; 6.1 Phenotype; 6.2 Forward Genetics and QTL Analysis; 6.3 Reverse Genetics; 6.4 Prediction of Phenotype from Other Sources of Data; 6.5 Integrating Phenotype Data with Systems Biology; 6.6 Integration of Phenotype Data in Databases; 6.7 Conclusions; References; 7 Ontologies and Functional Genomics; 7.1 Information Mining in Genome-Wide Functional Analysis; 7.2 Sources of Information: Free Text Versus Curated Repositories; 7.3 Bio-Ontologies and the Gene Ontology in Functional Genomics 7.4 Using GO to Translate the Results of Functional Genomic Experiments into Biological Knowledge7.5 Statistical Approaches to Test Significant Biological Differences; 7.6 Using FatiGO to Find Significant Functional Associations in Clusters of Genes; 7.7 Other Tools; 7.8 Examples of Functional Analysis of Clusters of Genes; 7.9 Future Prospects; References; 8 The C. elegans Interactome: its Generation and Visualization; 8.1 Introduction; 8.2 The ORFeome: the first step toward the interactome of C. elegans 8.3 Large-Scale High-Throughput Yeast Two-Hybrid Screens to Map the C. elegans Protein-Protein Interaction (Interactome) Network: Technical Aspects |
Record Nr. | UNINA-9910830512303321 |
Hoboken, NJ, : John Wiley, c2005 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|
DNA chromatography |
Autore | Gjerde Douglas T |
Pubbl/distr/stampa | [Place of publication not identified], : Wiley VCH, 2002 |
Descrizione fisica | 1 online resource (238 pages) |
Disciplina | 572.8/6 |
Soggetto topico |
DNA - Analysis
Chromatographic analysis DNA Chromatography, High Pressure Liquid Genetic Techniques Investigative Techniques Nucleic Acids Chromatography, Liquid Nucleic Acids, Nucleotides, and Nucleosides Analytical, Diagnostic and Therapeutic Techniques and Equipment Chromatography Chemistry Techniques, Analytical Chemicals and Drugs Animal Biochemistry Human Anatomy & Physiology Health & Biological Sciences |
Soggetto genere / forma | Electronic books. |
ISBN |
1-280-55844-X
9786610558445 3-527-60074-4 |
Formato | Materiale a stampa ![]() |
Livello bibliografico | Monografia |
Lingua di pubblicazione | eng |
Record Nr. | UNINA-9910146247903321 |
Gjerde Douglas T
![]() |
||
[Place of publication not identified], : Wiley VCH, 2002 | ||
![]() | ||
Lo trovi qui: Univ. Federico II | ||
|