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Proteomic applications in cancer detection and discovery [[electronic resource] /] / Timothy D. Veenstra
Proteomic applications in cancer detection and discovery [[electronic resource] /] / Timothy D. Veenstra
Autore Veenstra Timothy Daniel <1966->
Pubbl/distr/stampa Hoboken, NJ, : John Wiley & Sons, Inc., c2013
Descrizione fisica 1 online resource (320 p.)
Disciplina 616.99/4042
Soggetto topico Biochemical markers
Cancer - Genetic aspects
Proteomics
ISBN 1-118-63441-1
1-118-63449-7
1-118-63456-X
Classificazione SCI029000
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto PROTEOMIC APPLICATIONS IN CANCER DETECTION AND DISCOVERY; CONTENTS; PREFACE; ACKNOWLEDGMENTS; 1 SYSTEMS BIOLOGY; 1.1 INTRODUCTION; 1.2 WHAT IS SYSTEMS BIOLOGY?; 1.3 WHAT SYSTEMS DO WE NEED TO STUDY?; 1.3.1 Genomics; 1.3.2 Transcriptomics; 1.3.3 Proteomics; 1.3.4 Metabolomics; 1.4 CANCER IS A SYSTEMS BIOLOGY DISEASE; 1.5 MODELING SYSTEMS BIOLOGY; 1.6 DATA INTEGRATION; 1.6.1 Integrating Transcriptomics and Proteomics; 1.7 CONCLUSIONS; REFERENCES; 2 MASS SPECTROMETRY INCANCER RESEARCH; 2.1 INTRODUCTION; 2.2 MASS SPECTROMETRY: THE TECHNOLOGY DRIVING CANCERPROTEIN BIOMARKER DISCOVERY
2.2.1 Ion Sources2.2.2 Electrospray Ionization; 2.2.3 Matrix-Assisted Laser Desorption/Ionization; 2.3 TYPES OF MASS SPECTROMETERS; 2.3.1 Ion-Trap Mass Spectrometer; 2.3.2 Fourier Transform Ion Cyclotron Resonance MS; 2.3.3 Orbitrap Mass Spectrometer; 2.3.4 TOF Mass Spectrometer; 2.3.5 Triple-Quadrupole Mass Spectrometer; 2.3.6 Triple-Quadrupole TOF Mass Spectrometer; 2.4 PROTEIN FRACTIONATION; 2.4.1 Polyacrylamide Gel Electrophoresis; 2.4.2 Liquid Chromatography; 2.5 IMPACT OF MS IN CANCER; 2.5.1 Identification of a Drug Target; 2.6 CONCLUSIONS; REFERENCES; 3 QUANTITATIVE PROTEOMICS
3.1 INTRODUCTION3.2 WHAT IS BEING MEASURED IN QUANTITATIVE PROTEOMICS?; 3.3 TWO-DIMENSIONAL POLYACRYLAMIDE GEL ELECTROPHORESIS; 3.4 TWO-DIMENSIONAL DIFFERENCE GEL ELECTROPHORESIS; 3.5 SOLUTION-BASED QUANTITATIVE METHODS; 3.5.1 Stable Isotope Labeling; 3.5.2 Isotope-Coded Affinity Tags; 3.5.3 Isobaric Tag for Relative and Absolute Quantitation; 3.5.4 Stable Isotope Labeling of Amino Acids in Culture; 3.6 NONISOTOPIC SOLUTION-BASED QUANTITATION; 3.6.1 Subtractive Proteomics-Peptide Counting; 3.6.2 Subtractive Proteomics-Peak Intensity; 3.7 CONCLUSIONS; REFERENCES
4 PROTEOMIC ANALYSIS OF POSTTRANSLATIONAL MODIFICATIONS4.1 INTRODUCTION; 4.2 PHOSPHORYLATION; 4.2.1 Identification of Phosphorylated Proteins; 4.2.2 Phosphopeptide Mapping; 4.2.3 Collision-Induced Dissociation; 4.2.4 Electron Capture and Electron Transfer Dissociation; 4.2.5 Electron Transfer Dissociation; 4.2.6 Enrichment of Phosphopeptides; 4.2.7 Immunoaffinity Chromatography; 4.2.8 Immobilized Metal Affinity Chromatography; 4.2.9 Metal Oxide Affinity Chromatography; 4.3 GLYCOSYLATION; 4.3.1 Mass Spectrometry Characterization; 4.3.2 Electron Capture and Electron Transfer Dissociation
4.3.3 Targeted Identification of Glycoproteins4.3.4 Proteome-Wide Identification of Glycoproteins; 4.4 OTHER POSTTRANSLATIONAL MODIFICATIONS; 4.5 CONCLUSIONS; REFERENCES; 5 CHARACTERIZATION OF PROTEIN COMPLEXES; 5.1 INTRODUCTION; 5.2 METHODS FOR ISOLATING PROTEIN COMPLEXES; 5.2.1 Optimizing Protein Complex Isolation; 5.2.2 Importance of Optimizing Isolation Conditions; 5.2.3 Oligoprecipitation; 5.3 PROTEOME SCREENING USING TANDEM AFFINITY PURIFICATION; 5.4 YEAST TWO-HYBRID SCREENING; 5.5 QUICK LC-MS METHOD TO IDENTIFY SPECIFICALLY BOUND PROTEINS; 5.6 PROTEIN ARRAYS
5.7 FLUORESCENCE MICROSCOPY
Record Nr. UNINA-9910139055103321
Veenstra Timothy Daniel <1966->  
Hoboken, NJ, : John Wiley & Sons, Inc., c2013
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui
Proteomic applications in cancer detection and discovery / / Timothy D. Veenstra
Proteomic applications in cancer detection and discovery / / Timothy D. Veenstra
Autore Veenstra Timothy Daniel <1966->
Edizione [1st ed.]
Pubbl/distr/stampa Hoboken, NJ, : John Wiley & Sons, Inc., c2013
Descrizione fisica 1 online resource (320 p.)
Disciplina 616.99/4042
Soggetto topico Biochemical markers
Cancer - Genetic aspects
Proteomics
ISBN 9781118634417
1118634411
9781118634493
1118634497
9781118634561
111863456X
Classificazione SCI029000
Formato Materiale a stampa
Livello bibliografico Monografia
Lingua di pubblicazione eng
Nota di contenuto PROTEOMIC APPLICATIONS IN CANCER DETECTION AND DISCOVERY; CONTENTS; PREFACE; ACKNOWLEDGMENTS; 1 SYSTEMS BIOLOGY; 1.1 INTRODUCTION; 1.2 WHAT IS SYSTEMS BIOLOGY?; 1.3 WHAT SYSTEMS DO WE NEED TO STUDY?; 1.3.1 Genomics; 1.3.2 Transcriptomics; 1.3.3 Proteomics; 1.3.4 Metabolomics; 1.4 CANCER IS A SYSTEMS BIOLOGY DISEASE; 1.5 MODELING SYSTEMS BIOLOGY; 1.6 DATA INTEGRATION; 1.6.1 Integrating Transcriptomics and Proteomics; 1.7 CONCLUSIONS; REFERENCES; 2 MASS SPECTROMETRY INCANCER RESEARCH; 2.1 INTRODUCTION; 2.2 MASS SPECTROMETRY: THE TECHNOLOGY DRIVING CANCERPROTEIN BIOMARKER DISCOVERY
2.2.1 Ion Sources2.2.2 Electrospray Ionization; 2.2.3 Matrix-Assisted Laser Desorption/Ionization; 2.3 TYPES OF MASS SPECTROMETERS; 2.3.1 Ion-Trap Mass Spectrometer; 2.3.2 Fourier Transform Ion Cyclotron Resonance MS; 2.3.3 Orbitrap Mass Spectrometer; 2.3.4 TOF Mass Spectrometer; 2.3.5 Triple-Quadrupole Mass Spectrometer; 2.3.6 Triple-Quadrupole TOF Mass Spectrometer; 2.4 PROTEIN FRACTIONATION; 2.4.1 Polyacrylamide Gel Electrophoresis; 2.4.2 Liquid Chromatography; 2.5 IMPACT OF MS IN CANCER; 2.5.1 Identification of a Drug Target; 2.6 CONCLUSIONS; REFERENCES; 3 QUANTITATIVE PROTEOMICS
3.1 INTRODUCTION3.2 WHAT IS BEING MEASURED IN QUANTITATIVE PROTEOMICS?; 3.3 TWO-DIMENSIONAL POLYACRYLAMIDE GEL ELECTROPHORESIS; 3.4 TWO-DIMENSIONAL DIFFERENCE GEL ELECTROPHORESIS; 3.5 SOLUTION-BASED QUANTITATIVE METHODS; 3.5.1 Stable Isotope Labeling; 3.5.2 Isotope-Coded Affinity Tags; 3.5.3 Isobaric Tag for Relative and Absolute Quantitation; 3.5.4 Stable Isotope Labeling of Amino Acids in Culture; 3.6 NONISOTOPIC SOLUTION-BASED QUANTITATION; 3.6.1 Subtractive Proteomics-Peptide Counting; 3.6.2 Subtractive Proteomics-Peak Intensity; 3.7 CONCLUSIONS; REFERENCES
4 PROTEOMIC ANALYSIS OF POSTTRANSLATIONAL MODIFICATIONS4.1 INTRODUCTION; 4.2 PHOSPHORYLATION; 4.2.1 Identification of Phosphorylated Proteins; 4.2.2 Phosphopeptide Mapping; 4.2.3 Collision-Induced Dissociation; 4.2.4 Electron Capture and Electron Transfer Dissociation; 4.2.5 Electron Transfer Dissociation; 4.2.6 Enrichment of Phosphopeptides; 4.2.7 Immunoaffinity Chromatography; 4.2.8 Immobilized Metal Affinity Chromatography; 4.2.9 Metal Oxide Affinity Chromatography; 4.3 GLYCOSYLATION; 4.3.1 Mass Spectrometry Characterization; 4.3.2 Electron Capture and Electron Transfer Dissociation
4.3.3 Targeted Identification of Glycoproteins4.3.4 Proteome-Wide Identification of Glycoproteins; 4.4 OTHER POSTTRANSLATIONAL MODIFICATIONS; 4.5 CONCLUSIONS; REFERENCES; 5 CHARACTERIZATION OF PROTEIN COMPLEXES; 5.1 INTRODUCTION; 5.2 METHODS FOR ISOLATING PROTEIN COMPLEXES; 5.2.1 Optimizing Protein Complex Isolation; 5.2.2 Importance of Optimizing Isolation Conditions; 5.2.3 Oligoprecipitation; 5.3 PROTEOME SCREENING USING TANDEM AFFINITY PURIFICATION; 5.4 YEAST TWO-HYBRID SCREENING; 5.5 QUICK LC-MS METHOD TO IDENTIFY SPECIFICALLY BOUND PROTEINS; 5.6 PROTEIN ARRAYS
5.7 FLUORESCENCE MICROSCOPY
Record Nr. UNINA-9910821926703321
Veenstra Timothy Daniel <1966->  
Hoboken, NJ, : John Wiley & Sons, Inc., c2013
Materiale a stampa
Lo trovi qui: Univ. Federico II
Opac: Controlla la disponibilità qui