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Bioinformatics : high performance parallel computer architectures / / edited by Bertil Schmidt
| Bioinformatics : high performance parallel computer architectures / / edited by Bertil Schmidt |
| Pubbl/distr/stampa | Boca Raton : , : CRC Press, , 2010 |
| Descrizione fisica | 1 online resource (372 p.) |
| Disciplina | 572.80285 |
| Altri autori (Persone) | SchmidtBertil |
| Collana | Embedded multi-core systems |
| Soggetto topico |
Bioinformatics - Data processing
Parallel processing (Electronic computers) |
| Soggetto genere / forma | Electronic books. |
| ISBN |
0-429-13222-0
1-4398-1489-9 |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Front cover; Contents; Editor; Contributors; Chapter 1: Algorithms for Bioinformatics; Chapter 2: Introduction to GPGPUs andMassively Threaded Programming; Chapter 3: FPGA: Architecture and Programming; Chapter 4: Parallel Algorithms forAlignments on the Cell BE; Chapter 5: Orchestrating the PhylogeneticLikelihood Function on EmergingParallel Architectures; Chapter 6: Parallel Bioinformatics Algorithmsfor CUDA-Enabled GPUs; Chapter 7: CUDA Error Correction Method forHigh-Throughput Short-Read Sequencing Data; Chapter 8: FPGA Acceleration of SeededSimilarity Searching
Chapter 9: Seed-Based Parallel Protein SequenceComparison Combining Multithreading,GPU, and FPGA TechnologiesChapter 10: Database Searching with Profi le-HiddenMarkov Models on Reconfi gurableand Many-Core Architectures; Chapter 11: COPACOBANA: A Massively ParallelFPGA-Based Computer Architecture; Chapter 12: Accelerating String Set Matching forBioinformatics Using FPGA Hardware; Chapter 13: Reconfi gurable Neural System and ItsApplication to Dimeric ProteinBinding Site Identification; Chapter 14: Parallel FPGA Search Enginefor Protein Identification; Index; Back cover |
| Record Nr. | UNINA-9910459426003321 |
| Boca Raton : , : CRC Press, , 2010 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Bioinformatics : high performance parallel computer architectures / / edited by Bertil Schmidt
| Bioinformatics : high performance parallel computer architectures / / edited by Bertil Schmidt |
| Pubbl/distr/stampa | Boca Raton : , : CRC Press, , 2010 |
| Descrizione fisica | 1 online resource (372 p.) |
| Disciplina | 572.80285 |
| Altri autori (Persone) | SchmidtBertil |
| Collana | Embedded multi-core systems |
| Soggetto topico |
Bioinformatics - Data processing
Parallel processing (Electronic computers) |
| ISBN |
0-429-13222-0
1-4398-1489-9 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Front cover; Contents; Editor; Contributors; Chapter 1: Algorithms for Bioinformatics; Chapter 2: Introduction to GPGPUs andMassively Threaded Programming; Chapter 3: FPGA: Architecture and Programming; Chapter 4: Parallel Algorithms forAlignments on the Cell BE; Chapter 5: Orchestrating the PhylogeneticLikelihood Function on EmergingParallel Architectures; Chapter 6: Parallel Bioinformatics Algorithmsfor CUDA-Enabled GPUs; Chapter 7: CUDA Error Correction Method forHigh-Throughput Short-Read Sequencing Data; Chapter 8: FPGA Acceleration of SeededSimilarity Searching
Chapter 9: Seed-Based Parallel Protein SequenceComparison Combining Multithreading,GPU, and FPGA TechnologiesChapter 10: Database Searching with Profi le-HiddenMarkov Models on Reconfi gurableand Many-Core Architectures; Chapter 11: COPACOBANA: A Massively ParallelFPGA-Based Computer Architecture; Chapter 12: Accelerating String Set Matching forBioinformatics Using FPGA Hardware; Chapter 13: Reconfi gurable Neural System and ItsApplication to Dimeric ProteinBinding Site Identification; Chapter 14: Parallel FPGA Search Enginefor Protein Identification; Index; Back cover |
| Record Nr. | UNINA-9910784903403321 |
| Boca Raton : , : CRC Press, , 2010 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Bioinformatics : high performance parallel computer architectures / / edited by Bertil Schmidt
| Bioinformatics : high performance parallel computer architectures / / edited by Bertil Schmidt |
| Edizione | [1st ed.] |
| Pubbl/distr/stampa | Boca Raton, FL, : CRC Press, 2010 |
| Descrizione fisica | 1 online resource (372 p.) |
| Disciplina | 572.80285 |
| Altri autori (Persone) | SchmidtBertil |
| Collana | Embedded multi-core systems |
| Soggetto topico |
Bioinformatics - Data processing
Parallel processing (Electronic computers) |
| ISBN |
0-429-13222-0
1-4398-1489-9 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Front cover; Contents; Editor; Contributors; Chapter 1: Algorithms for Bioinformatics; Chapter 2: Introduction to GPGPUs andMassively Threaded Programming; Chapter 3: FPGA: Architecture and Programming; Chapter 4: Parallel Algorithms forAlignments on the Cell BE; Chapter 5: Orchestrating the PhylogeneticLikelihood Function on EmergingParallel Architectures; Chapter 6: Parallel Bioinformatics Algorithmsfor CUDA-Enabled GPUs; Chapter 7: CUDA Error Correction Method forHigh-Throughput Short-Read Sequencing Data; Chapter 8: FPGA Acceleration of SeededSimilarity Searching
Chapter 9: Seed-Based Parallel Protein SequenceComparison Combining Multithreading,GPU, and FPGA TechnologiesChapter 10: Database Searching with Profi le-HiddenMarkov Models on Reconfi gurableand Many-Core Architectures; Chapter 11: COPACOBANA: A Massively ParallelFPGA-Based Computer Architecture; Chapter 12: Accelerating String Set Matching forBioinformatics Using FPGA Hardware; Chapter 13: Reconfi gurable Neural System and ItsApplication to Dimeric ProteinBinding Site Identification; Chapter 14: Parallel FPGA Search Enginefor Protein Identification; Index; Back cover |
| Record Nr. | UNINA-9910809096003321 |
| Boca Raton, FL, : CRC Press, 2010 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Pattern recognition in bioinformatics : second IAPR international workshop, PRIB 2007, Singapore, October 1-2, 2007 : proceedings / / Jagath C. Rajapakse, Bertil Schmidt, Gwenn Volkert (eds.)
| Pattern recognition in bioinformatics : second IAPR international workshop, PRIB 2007, Singapore, October 1-2, 2007 : proceedings / / Jagath C. Rajapakse, Bertil Schmidt, Gwenn Volkert (eds.) |
| Edizione | [1st ed. 2007.] |
| Pubbl/distr/stampa | Berlin, Germany ; ; New York, New York : , : Springer, , [2007] |
| Descrizione fisica | 1 online resource (XVIII, 410 p.) |
| Disciplina | 572.80285 |
| Collana | Lecture notes in computer science. Lecture notes in bioinformatics |
| Soggetto topico |
Bioinformatics
Computational biology Computer vision in medicine |
| ISBN | 3-540-75286-2 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Sequence Analysis -- Automated Methods of Predicting the Function of Biological Sequences Using GO and Rough Set -- C-Based Design Methodology for FPGA Implementation of ClustalW MSA -- A Two-Phase ANN Method for Genome-Wide Detection of Hormone Response Elements -- An Expert Knowledge-Guided Mutation Operator for Genome-Wide Genetic Analysis Using Genetic Programming -- cDNA-Derived Amino Acid Sequence from Rat Brain A2aR Possesses Conserved Motifs PMNYM of TM 5 Domain, Which May Be Involved in Dimerization of A2aR -- Strong GC and AT Skew Correlation in Chicken Genome -- Comparative Analysis of a Hierarchical Bayesian Method for Quantitative Trait Loci Analysis for the Arabidopsis Thaliana -- Prediction of Protein Structure, Interaction and Localization -- Using Decision Templates to Predict Subcellular Localization of Protein -- Generalized Schemata Theorem Incorporating Twin Removal for Protein Structure Prediction -- Using Fuzzy Support Vector Machine Network to Predict Low Homology Protein Structural Classes -- SVM-BetaPred: Prediction of Right-Handed ß-Helix Fold from Protein Sequence Using SVM -- Protein Fold Recognition Based Upon the Amino Acid Occurrence -- Using Efficient RBF Network to Identify Interface Residues Based on PSSM Profiles and Biochemical Properties -- Dynamic Outlier Exclusion Training Algorithm for Sequence Based Predictions in Proteins Using Neural Network -- Bioinformatics on ?-Barrel Membrane Proteins: Sequence and Structural Analysis, Discrimination and Prediction -- Estimation of Evolutionary Average Hydrophobicity Profile from a Family of Protein Sequences -- Gene Expression Analysis -- APMA Database for Affymetrix Target Sequences Mapping, Quality Assessment and Expression Data Mining -- Ensemble of Dissimilarity Based Classifiers for Cancerous Samples Classification -- Gene Expression Analysis of Leukemia Samples Using Visual Interpretation of Small Ensembles: A Case Study -- Ant-MST: An Ant-Based Minimum Spanning Tree for Gene Expression Data Clustering -- Integrating Gene Expression Data from Microarrays Using the Self-Organising Map and the Gene Ontology -- Order Preserving Clustering by Finding Frequent Orders in Gene Expression Data -- Correlation-Based Relevancy and Redundancy Measures for Efficient Gene Selection -- SVM-RFE with Relevancy and Redundancy Criteria for Gene Selection -- In Silico Expression Profiles of Human Endogenous Retroviruses -- Pathway Analysis -- A Framework for Path Analysis in Gene Regulatory Networks -- Transcriptional Gene Regulatory Network Reconstruction Through Cross Platform Gene Network Fusion -- Reconstruction of Protein-Protein Interaction Pathways by Mining Subject-Verb-Objects Intermediates -- Validation of Gene Regulatory Networks from Protein-Protein Interaction Data: Application to Cell-Cycle Regulation -- Medical Informatics -- Rough Sets and Fuzzy Sets Theory Applied to the Sequential Medical Diagnosis -- In silico Identification of Putative Drug Targets in Pseudomonas aeruginosa Through Metabolic Pathway Analysis -- Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope Identification -- Predicting Binding Peptides with Simultaneous Optimization of Entropy and Evolutionary Distance -- Bioimaging -- 3D Automated Nuclear Morphometric Analysis Using Active Meshes -- Time-Frequency Method Based Activation Detection in Functional MRI Time-Series -- High Performance Classification of Two Imagery Tasks in the Cue-Based Brain Computer Interface -- Human Brain Anatomical Connectivity Analysis Using Sequential Sampling and Resampling -- Classification of CT Brain Images of Head Trauma. |
| Record Nr. | UNINA-9910483058203321 |
| Berlin, Germany ; ; New York, New York : , : Springer, , [2007] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Pattern recognition in bioinformatics : second IAPR international workshop, PRIB 2007, Singapore, October 1-2, 2007 : proceedings / / Jagath C. Rajapakse, Bertil Schmidt, Gwenn Volkert (eds.)
| Pattern recognition in bioinformatics : second IAPR international workshop, PRIB 2007, Singapore, October 1-2, 2007 : proceedings / / Jagath C. Rajapakse, Bertil Schmidt, Gwenn Volkert (eds.) |
| Edizione | [1st ed. 2007.] |
| Pubbl/distr/stampa | Berlin, Germany ; ; New York, New York : , : Springer, , [2007] |
| Descrizione fisica | 1 online resource (XVIII, 410 p.) |
| Disciplina | 572.80285 |
| Collana | Lecture notes in computer science. Lecture notes in bioinformatics |
| Soggetto topico |
Bioinformatics
Computational biology Computer vision in medicine |
| ISBN | 3-540-75286-2 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Sequence Analysis -- Automated Methods of Predicting the Function of Biological Sequences Using GO and Rough Set -- C-Based Design Methodology for FPGA Implementation of ClustalW MSA -- A Two-Phase ANN Method for Genome-Wide Detection of Hormone Response Elements -- An Expert Knowledge-Guided Mutation Operator for Genome-Wide Genetic Analysis Using Genetic Programming -- cDNA-Derived Amino Acid Sequence from Rat Brain A2aR Possesses Conserved Motifs PMNYM of TM 5 Domain, Which May Be Involved in Dimerization of A2aR -- Strong GC and AT Skew Correlation in Chicken Genome -- Comparative Analysis of a Hierarchical Bayesian Method for Quantitative Trait Loci Analysis for the Arabidopsis Thaliana -- Prediction of Protein Structure, Interaction and Localization -- Using Decision Templates to Predict Subcellular Localization of Protein -- Generalized Schemata Theorem Incorporating Twin Removal for Protein Structure Prediction -- Using Fuzzy Support Vector Machine Network to Predict Low Homology Protein Structural Classes -- SVM-BetaPred: Prediction of Right-Handed ß-Helix Fold from Protein Sequence Using SVM -- Protein Fold Recognition Based Upon the Amino Acid Occurrence -- Using Efficient RBF Network to Identify Interface Residues Based on PSSM Profiles and Biochemical Properties -- Dynamic Outlier Exclusion Training Algorithm for Sequence Based Predictions in Proteins Using Neural Network -- Bioinformatics on ?-Barrel Membrane Proteins: Sequence and Structural Analysis, Discrimination and Prediction -- Estimation of Evolutionary Average Hydrophobicity Profile from a Family of Protein Sequences -- Gene Expression Analysis -- APMA Database for Affymetrix Target Sequences Mapping, Quality Assessment and Expression Data Mining -- Ensemble of Dissimilarity Based Classifiers for Cancerous Samples Classification -- Gene Expression Analysis of Leukemia Samples Using Visual Interpretation of Small Ensembles: A Case Study -- Ant-MST: An Ant-Based Minimum Spanning Tree for Gene Expression Data Clustering -- Integrating Gene Expression Data from Microarrays Using the Self-Organising Map and the Gene Ontology -- Order Preserving Clustering by Finding Frequent Orders in Gene Expression Data -- Correlation-Based Relevancy and Redundancy Measures for Efficient Gene Selection -- SVM-RFE with Relevancy and Redundancy Criteria for Gene Selection -- In Silico Expression Profiles of Human Endogenous Retroviruses -- Pathway Analysis -- A Framework for Path Analysis in Gene Regulatory Networks -- Transcriptional Gene Regulatory Network Reconstruction Through Cross Platform Gene Network Fusion -- Reconstruction of Protein-Protein Interaction Pathways by Mining Subject-Verb-Objects Intermediates -- Validation of Gene Regulatory Networks from Protein-Protein Interaction Data: Application to Cell-Cycle Regulation -- Medical Informatics -- Rough Sets and Fuzzy Sets Theory Applied to the Sequential Medical Diagnosis -- In silico Identification of Putative Drug Targets in Pseudomonas aeruginosa Through Metabolic Pathway Analysis -- Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope Identification -- Predicting Binding Peptides with Simultaneous Optimization of Entropy and Evolutionary Distance -- Bioimaging -- 3D Automated Nuclear Morphometric Analysis Using Active Meshes -- Time-Frequency Method Based Activation Detection in Functional MRI Time-Series -- High Performance Classification of Two Imagery Tasks in the Cue-Based Brain Computer Interface -- Human Brain Anatomical Connectivity Analysis Using Sequential Sampling and Resampling -- Classification of CT Brain Images of Head Trauma. |
| Record Nr. | UNISA-996465867303316 |
| Berlin, Germany ; ; New York, New York : , : Springer, , [2007] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. di Salerno | ||
| ||