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Bioinformatics, biocomputing and Perl [[electronic resource] ] : an introduction to bioinformatics computing skills and practice / / Michael Moorhouse, Paul Barry
| Bioinformatics, biocomputing and Perl [[electronic resource] ] : an introduction to bioinformatics computing skills and practice / / Michael Moorhouse, Paul Barry |
| Autore | Moorhouse Michael |
| Pubbl/distr/stampa | Chichester ; ; Hoboken, NJ, : Wiley, c2004 |
| Descrizione fisica | 1 online resource (507 p.) |
| Disciplina |
570.285
570.285571262 |
| Altri autori (Persone) | BarryPaul <1966-> |
| Soggetto topico |
Bioinformatics
Computational biology Perl (Computer program language) |
| Soggetto genere / forma | Electronic books. |
| ISBN |
1-280-23868-2
9786610238682 0-470-02645-6 0-470-02057-1 |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Bioinformatics Biocomputing and Perl; Contents; Preface; 1 Setting the Biological Scene; 1.1 Introducing Biological Sequence Analysis; 1.2 Protein and Polypeptides; 1.3 Generalised Models and their Use; 1.4 The Central Dogma of Molecular Biology; 1.4.1 Transcription; 1.4.2 Translation; 1.5 Genome Sequencing; 1.5.1 Sequence assembly; 1.6 The Example DNA-gene-protein system we will use; Where to from Here; 2 Setting the Technological Scene; 2.1 The Layers of Technology; 2.1.1 From passive user to active developer; 2.2 Finding perl; 2.2.1 Checking for perl; Where to from Here
I Working with Perl3 The Basics; 3.1 Let's Get Started!; 3.1.1 Running Perl programs; 3.1.2 Syntax and semantics; 3.1.3 Program: run thyself!; 3.2 Iteration; 3.2.1 Using the Perl while construct; 3.3 More Iterations; 3.3.1 Introducing variable containers; 3.3.2 Variable containers and loops; 3.4 Selection; 3.4.1 Using the Perl if construct; 3.5 There Really is MTOWTDI; 3.6 Processing Data Files; 3.6.1 Asking getlines to do more; 3.7 Introducing Patterns; Where to from Here; The Maxims Repeated; 4 Places to Put Things; 4.1 Beyond Scalars; 4.2 Arrays: Associating Data with Numbers 4.2.1 Working with array elements4.2.2 How big is the array?; 4.2.3 Adding elements to an array; 4.2.4 Removing elements from an array; 4.2.5 Slicing arrays; 4.2.6 Pushing, popping, shifting and unshifting; 4.2.7 Processing every element in an array; 4.2.8 Making lists easier to work with; 4.3 Hashes: Associating Data with Words; 4.3.1 Working with hash entries; 4.3.2 How big is the hash?; 4.3.3 Adding entries to a hash; 4.3.4 Removing entries from a hash; 4.3.5 Slicing hashes; 4.3.6 Working with hash entries: a complete example; 4.3.7 Processing every entry in a hash; Where to from Here The Maxims Repeated5 Getting Organised; 5.1 Named Blocks; 5.2 Introducing Subroutines; 5.2.1 Calling subroutines; 5.3 Creating Subroutines; 5.3.1 Processing parameters; 5.3.2 Better processing of parameters; 5.3.3 Even better processing of parameters; 5.3.4 A more flexible drawline subroutine; 5.3.5 Returning results; 5.4 Visibility and Scope; 5.4.1 Using private variables; 5.4.2 Using global variables properly; 5.4.3 The final version of drawline; 5.5 In-built Subroutines; 5.6 Grouping and Reusing Subroutines; 5.6.1 Modules; 5.7 The Standard Modules; 5.8 CPAN: The Module Repository 5.8.1 Searching CPAN5.8.2 Installing a CPAN module manually; 5.8.3 Installing a CPAN module automatically; 5.8.4 A final word on CPAN modules; Where to from Here; The Maxims Repeated; 6 About Files; 6.1 I/O: Input and Output; 6.1.1 The standard streams: STDIN, STDOUT and STDERR; 6.2 Reading Files; 6.2.1 Determining the disk-file names; 6.2.2 Opening the named disk-files; 6.2.3 Reading a line from each of the disk-files; 6.2.4 Putting it all together; 6.2.5 Slurping; 6.3 Writing Files; 6.3.1 Redirecting output; 6.3.2 Variable interpolation; 6.4 Chopping and Chomping; Where to from Here The Maxims Repeated |
| Record Nr. | UNINA-9910142732603321 |
Moorhouse Michael
|
||
| Chichester ; ; Hoboken, NJ, : Wiley, c2004 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Bioinformatics, biocomputing and Perl [[electronic resource] ] : an introduction to bioinformatics computing skills and practice / / Michael Moorhouse, Paul Barry
| Bioinformatics, biocomputing and Perl [[electronic resource] ] : an introduction to bioinformatics computing skills and practice / / Michael Moorhouse, Paul Barry |
| Autore | Moorhouse Michael |
| Pubbl/distr/stampa | Chichester ; ; Hoboken, NJ, : Wiley, c2004 |
| Descrizione fisica | 1 online resource (507 p.) |
| Disciplina |
570.285
570.285571262 |
| Altri autori (Persone) | BarryPaul <1966-> |
| Soggetto topico |
Bioinformatics
Computational biology Perl (Computer program language) |
| ISBN |
1-280-23868-2
9786610238682 0-470-02645-6 0-470-02057-1 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Bioinformatics Biocomputing and Perl; Contents; Preface; 1 Setting the Biological Scene; 1.1 Introducing Biological Sequence Analysis; 1.2 Protein and Polypeptides; 1.3 Generalised Models and their Use; 1.4 The Central Dogma of Molecular Biology; 1.4.1 Transcription; 1.4.2 Translation; 1.5 Genome Sequencing; 1.5.1 Sequence assembly; 1.6 The Example DNA-gene-protein system we will use; Where to from Here; 2 Setting the Technological Scene; 2.1 The Layers of Technology; 2.1.1 From passive user to active developer; 2.2 Finding perl; 2.2.1 Checking for perl; Where to from Here
I Working with Perl3 The Basics; 3.1 Let's Get Started!; 3.1.1 Running Perl programs; 3.1.2 Syntax and semantics; 3.1.3 Program: run thyself!; 3.2 Iteration; 3.2.1 Using the Perl while construct; 3.3 More Iterations; 3.3.1 Introducing variable containers; 3.3.2 Variable containers and loops; 3.4 Selection; 3.4.1 Using the Perl if construct; 3.5 There Really is MTOWTDI; 3.6 Processing Data Files; 3.6.1 Asking getlines to do more; 3.7 Introducing Patterns; Where to from Here; The Maxims Repeated; 4 Places to Put Things; 4.1 Beyond Scalars; 4.2 Arrays: Associating Data with Numbers 4.2.1 Working with array elements4.2.2 How big is the array?; 4.2.3 Adding elements to an array; 4.2.4 Removing elements from an array; 4.2.5 Slicing arrays; 4.2.6 Pushing, popping, shifting and unshifting; 4.2.7 Processing every element in an array; 4.2.8 Making lists easier to work with; 4.3 Hashes: Associating Data with Words; 4.3.1 Working with hash entries; 4.3.2 How big is the hash?; 4.3.3 Adding entries to a hash; 4.3.4 Removing entries from a hash; 4.3.5 Slicing hashes; 4.3.6 Working with hash entries: a complete example; 4.3.7 Processing every entry in a hash; Where to from Here The Maxims Repeated5 Getting Organised; 5.1 Named Blocks; 5.2 Introducing Subroutines; 5.2.1 Calling subroutines; 5.3 Creating Subroutines; 5.3.1 Processing parameters; 5.3.2 Better processing of parameters; 5.3.3 Even better processing of parameters; 5.3.4 A more flexible drawline subroutine; 5.3.5 Returning results; 5.4 Visibility and Scope; 5.4.1 Using private variables; 5.4.2 Using global variables properly; 5.4.3 The final version of drawline; 5.5 In-built Subroutines; 5.6 Grouping and Reusing Subroutines; 5.6.1 Modules; 5.7 The Standard Modules; 5.8 CPAN: The Module Repository 5.8.1 Searching CPAN5.8.2 Installing a CPAN module manually; 5.8.3 Installing a CPAN module automatically; 5.8.4 A final word on CPAN modules; Where to from Here; The Maxims Repeated; 6 About Files; 6.1 I/O: Input and Output; 6.1.1 The standard streams: STDIN, STDOUT and STDERR; 6.2 Reading Files; 6.2.1 Determining the disk-file names; 6.2.2 Opening the named disk-files; 6.2.3 Reading a line from each of the disk-files; 6.2.4 Putting it all together; 6.2.5 Slurping; 6.3 Writing Files; 6.3.1 Redirecting output; 6.3.2 Variable interpolation; 6.4 Chopping and Chomping; Where to from Here The Maxims Repeated |
| Record Nr. | UNINA-9910830644503321 |
|
Moorhouse Michael
|
||
| Chichester ; ; Hoboken, NJ, : Wiley, c2004 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Bioinformatics, biocomputing and Perl : an introduction to bioinformatics computing skills and practice / / Michael Moorhouse, Paul Barry
| Bioinformatics, biocomputing and Perl : an introduction to bioinformatics computing skills and practice / / Michael Moorhouse, Paul Barry |
| Autore | Moorhouse Michael |
| Pubbl/distr/stampa | Chichester ; ; Hoboken, NJ, : Wiley, c2004 |
| Descrizione fisica | 1 online resource (507 p.) |
| Disciplina |
570.285
570.285571262 |
| Altri autori (Persone) | BarryPaul <1966-> |
| Soggetto topico |
Bioinformatics
Computational biology Perl (Computer program language) |
| ISBN |
1-280-23868-2
9786610238682 0-470-02645-6 0-470-02057-1 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Bioinformatics Biocomputing and Perl; Contents; Preface; 1 Setting the Biological Scene; 1.1 Introducing Biological Sequence Analysis; 1.2 Protein and Polypeptides; 1.3 Generalised Models and their Use; 1.4 The Central Dogma of Molecular Biology; 1.4.1 Transcription; 1.4.2 Translation; 1.5 Genome Sequencing; 1.5.1 Sequence assembly; 1.6 The Example DNA-gene-protein system we will use; Where to from Here; 2 Setting the Technological Scene; 2.1 The Layers of Technology; 2.1.1 From passive user to active developer; 2.2 Finding perl; 2.2.1 Checking for perl; Where to from Here
I Working with Perl3 The Basics; 3.1 Let's Get Started!; 3.1.1 Running Perl programs; 3.1.2 Syntax and semantics; 3.1.3 Program: run thyself!; 3.2 Iteration; 3.2.1 Using the Perl while construct; 3.3 More Iterations; 3.3.1 Introducing variable containers; 3.3.2 Variable containers and loops; 3.4 Selection; 3.4.1 Using the Perl if construct; 3.5 There Really is MTOWTDI; 3.6 Processing Data Files; 3.6.1 Asking getlines to do more; 3.7 Introducing Patterns; Where to from Here; The Maxims Repeated; 4 Places to Put Things; 4.1 Beyond Scalars; 4.2 Arrays: Associating Data with Numbers 4.2.1 Working with array elements4.2.2 How big is the array?; 4.2.3 Adding elements to an array; 4.2.4 Removing elements from an array; 4.2.5 Slicing arrays; 4.2.6 Pushing, popping, shifting and unshifting; 4.2.7 Processing every element in an array; 4.2.8 Making lists easier to work with; 4.3 Hashes: Associating Data with Words; 4.3.1 Working with hash entries; 4.3.2 How big is the hash?; 4.3.3 Adding entries to a hash; 4.3.4 Removing entries from a hash; 4.3.5 Slicing hashes; 4.3.6 Working with hash entries: a complete example; 4.3.7 Processing every entry in a hash; Where to from Here The Maxims Repeated5 Getting Organised; 5.1 Named Blocks; 5.2 Introducing Subroutines; 5.2.1 Calling subroutines; 5.3 Creating Subroutines; 5.3.1 Processing parameters; 5.3.2 Better processing of parameters; 5.3.3 Even better processing of parameters; 5.3.4 A more flexible drawline subroutine; 5.3.5 Returning results; 5.4 Visibility and Scope; 5.4.1 Using private variables; 5.4.2 Using global variables properly; 5.4.3 The final version of drawline; 5.5 In-built Subroutines; 5.6 Grouping and Reusing Subroutines; 5.6.1 Modules; 5.7 The Standard Modules; 5.8 CPAN: The Module Repository 5.8.1 Searching CPAN5.8.2 Installing a CPAN module manually; 5.8.3 Installing a CPAN module automatically; 5.8.4 A final word on CPAN modules; Where to from Here; The Maxims Repeated; 6 About Files; 6.1 I/O: Input and Output; 6.1.1 The standard streams: STDIN, STDOUT and STDERR; 6.2 Reading Files; 6.2.1 Determining the disk-file names; 6.2.2 Opening the named disk-files; 6.2.3 Reading a line from each of the disk-files; 6.2.4 Putting it all together; 6.2.5 Slurping; 6.3 Writing Files; 6.3.1 Redirecting output; 6.3.2 Variable interpolation; 6.4 Chopping and Chomping; Where to from Here The Maxims Repeated |
| Record Nr. | UNINA-9910877244203321 |
|
Moorhouse Michael
|
||
| Chichester ; ; Hoboken, NJ, : Wiley, c2004 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||