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Control of primary metabolism in plants [[electronic resource] /] / edited by William C. Plaxton and Michael T. McManus
| Control of primary metabolism in plants [[electronic resource] /] / edited by William C. Plaxton and Michael T. McManus |
| Pubbl/distr/stampa | Ames, Iowa, : Blackwell Pub., c2006 |
| Descrizione fisica | 1 online resource (412 p.) |
| Disciplina |
572.42
572/.42 580.5 |
| Altri autori (Persone) |
PlaxtonWilliam C
McManusMichael T |
| Collana | Annual Plant Reviews |
| Soggetto topico |
Plants - Metabolism
Botany |
| Soggetto genere / forma | Electronic books. |
| ISBN |
1-280-74844-3
9786610748440 0-470-76250-0 0-470-98864-9 1-4051-7209-6 |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Control of Primary Metabolism in Plants; Contents; Contributors; Preface; 1 Evaluation of the transcriptome and genome to inform the study of metabolic control in plants; 1.1 Introduction; 1.2 Transcript profiling technologies; 1.3 Transcript profiling workflow; 1.3.1 Data generation; 1.3.2 Data management; 1.3.3 Data processing; 1.3.3.1 Raw data handling; 1.3.3.2 Normalisation; 1.3.4 Data analysis; 1.3.4.1 Differential expression; 1.3.4.2 Data mining; 1.3.4.3 Functional categorisation; 1.3.5 Data visualisation; 1.4 What can we learn from transcript profiles performed in a starchless mutant?
1.5 Conclusion/perspectivesAcknowledgements; References; 2 The use of proteomics in the study of metabolic control; 2.1 Introduction; 2.2 Proteomic methodologies; 2.2.1 Extraction of proteins from plant tissue; 2.2.2 Separation, display and quantification of proteins; 2.2.3 Identification of proteins by mass spectrometry; 2.2.4 Gel-free proteomic approaches; 2.3 Cataloging protein localization; 2.3.1 Localizing proteins to different tissues; 2.3.2 Establishing subcellular protein localization: methodologies; 2.3.3 Mitochondrial and chloroplast proteomes; 2.3.4 Other subcellular proteomes 2.3.5 A stamp of authenticity for the subcellular protein postcode?2.4 Quantitative analyses of the proteome; 2.4.1 Examples of quantitative proteomics; 2.4.2 The use of high-throughput measurements of enzyme activity as a proxy for quantitative proteomics; 2.5 The use of proteomics to investigate post-translational modification of proteins; 2.5.1 Systematic identification of phosphorylated proteins; 2.5.2 Systematic identification of protein redox modifications; 2.6 The use of proteomics to investigate protein-protein interactions; 2.7 Future perspectives; References 3 Study of metabolic control in plants by metabolomics3.1 Introduction; 3.1.1 What is metabolomics?; 3.1.2 Systemic properties in metabolic networks; 3.2 Metabolomic methods; 3.2.1 Historic perspective of plant metabolite analysis; 3.2.2 Modern instrumentation in metabolite analysis; 3.2.3 Sample preparation for metabolomics; 3.2.4 Metabolome coverage; 3.2.4.1 The quest for combining sensitivity and selectivity; 3.2.4.2 Cellular and subcellular metabolomics; 3.2.4.3 Compound identification; 3.2.5 Quality control; 3.3 Metabolomic databases 3.4 Pathways, clusters and networks: applications of plant metabolomics3.4.1 Bioengineering of metabolism; 3.4.2 Plant biochemistry; 3.4.2.1 Pathway analysis; 3.4.2.2 Flux measurements; 3.4.3 Physiological studies; 3.4.4 Plant metabolomic methods; 3.4.5 Food science; 3.5 Outlook; References; 4 Metabolite transporters in the control of plant primary metabolism; 4.1 Introduction; 4.2 Photoassimilation and assimilate transport in source cells; 4.2.1 Carbon assimilation by the reductive pentose-phosphate pathway (Calvin cycle); 4.2.2 The plastidic triose-phosphate pool - a metabolic crossway 4.2.2.1 Communication between the starch and sucrose biosynthetic pathways via TPT |
| Record Nr. | UNINA-9910143311103321 |
| Ames, Iowa, : Blackwell Pub., c2006 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Control of primary metabolism in plants [[electronic resource] /] / edited by William C. Plaxton and Michael T. McManus
| Control of primary metabolism in plants [[electronic resource] /] / edited by William C. Plaxton and Michael T. McManus |
| Pubbl/distr/stampa | Ames, Iowa, : Blackwell Pub., c2006 |
| Descrizione fisica | 1 online resource (412 p.) |
| Disciplina |
572.42
572/.42 580.5 |
| Altri autori (Persone) |
PlaxtonWilliam C
McManusMichael T |
| Collana | Annual Plant Reviews |
| Soggetto topico |
Plants - Metabolism
Botany |
| ISBN |
1-280-74844-3
9786610748440 0-470-76250-0 0-470-98864-9 1-4051-7209-6 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Control of Primary Metabolism in Plants; Contents; Contributors; Preface; 1 Evaluation of the transcriptome and genome to inform the study of metabolic control in plants; 1.1 Introduction; 1.2 Transcript profiling technologies; 1.3 Transcript profiling workflow; 1.3.1 Data generation; 1.3.2 Data management; 1.3.3 Data processing; 1.3.3.1 Raw data handling; 1.3.3.2 Normalisation; 1.3.4 Data analysis; 1.3.4.1 Differential expression; 1.3.4.2 Data mining; 1.3.4.3 Functional categorisation; 1.3.5 Data visualisation; 1.4 What can we learn from transcript profiles performed in a starchless mutant?
1.5 Conclusion/perspectivesAcknowledgements; References; 2 The use of proteomics in the study of metabolic control; 2.1 Introduction; 2.2 Proteomic methodologies; 2.2.1 Extraction of proteins from plant tissue; 2.2.2 Separation, display and quantification of proteins; 2.2.3 Identification of proteins by mass spectrometry; 2.2.4 Gel-free proteomic approaches; 2.3 Cataloging protein localization; 2.3.1 Localizing proteins to different tissues; 2.3.2 Establishing subcellular protein localization: methodologies; 2.3.3 Mitochondrial and chloroplast proteomes; 2.3.4 Other subcellular proteomes 2.3.5 A stamp of authenticity for the subcellular protein postcode?2.4 Quantitative analyses of the proteome; 2.4.1 Examples of quantitative proteomics; 2.4.2 The use of high-throughput measurements of enzyme activity as a proxy for quantitative proteomics; 2.5 The use of proteomics to investigate post-translational modification of proteins; 2.5.1 Systematic identification of phosphorylated proteins; 2.5.2 Systematic identification of protein redox modifications; 2.6 The use of proteomics to investigate protein-protein interactions; 2.7 Future perspectives; References 3 Study of metabolic control in plants by metabolomics3.1 Introduction; 3.1.1 What is metabolomics?; 3.1.2 Systemic properties in metabolic networks; 3.2 Metabolomic methods; 3.2.1 Historic perspective of plant metabolite analysis; 3.2.2 Modern instrumentation in metabolite analysis; 3.2.3 Sample preparation for metabolomics; 3.2.4 Metabolome coverage; 3.2.4.1 The quest for combining sensitivity and selectivity; 3.2.4.2 Cellular and subcellular metabolomics; 3.2.4.3 Compound identification; 3.2.5 Quality control; 3.3 Metabolomic databases 3.4 Pathways, clusters and networks: applications of plant metabolomics3.4.1 Bioengineering of metabolism; 3.4.2 Plant biochemistry; 3.4.2.1 Pathway analysis; 3.4.2.2 Flux measurements; 3.4.3 Physiological studies; 3.4.4 Plant metabolomic methods; 3.4.5 Food science; 3.5 Outlook; References; 4 Metabolite transporters in the control of plant primary metabolism; 4.1 Introduction; 4.2 Photoassimilation and assimilate transport in source cells; 4.2.1 Carbon assimilation by the reductive pentose-phosphate pathway (Calvin cycle); 4.2.2 The plastidic triose-phosphate pool - a metabolic crossway 4.2.2.1 Communication between the starch and sucrose biosynthetic pathways via TPT |
| Record Nr. | UNISA-996213061403316 |
| Ames, Iowa, : Blackwell Pub., c2006 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. di Salerno | ||
| ||
Control of primary metabolism in plants [[electronic resource] /] / edited by William C. Plaxton and Michael T. McManus
| Control of primary metabolism in plants [[electronic resource] /] / edited by William C. Plaxton and Michael T. McManus |
| Pubbl/distr/stampa | Ames, Iowa, : Blackwell Pub., c2006 |
| Descrizione fisica | 1 online resource (412 p.) |
| Disciplina |
572.42
572/.42 580.5 |
| Altri autori (Persone) |
PlaxtonWilliam C
McManusMichael T |
| Collana | Annual Plant Reviews |
| Soggetto topico |
Plants - Metabolism
Botany |
| ISBN |
1-280-74844-3
9786610748440 0-470-76250-0 0-470-98864-9 1-4051-7209-6 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Control of Primary Metabolism in Plants; Contents; Contributors; Preface; 1 Evaluation of the transcriptome and genome to inform the study of metabolic control in plants; 1.1 Introduction; 1.2 Transcript profiling technologies; 1.3 Transcript profiling workflow; 1.3.1 Data generation; 1.3.2 Data management; 1.3.3 Data processing; 1.3.3.1 Raw data handling; 1.3.3.2 Normalisation; 1.3.4 Data analysis; 1.3.4.1 Differential expression; 1.3.4.2 Data mining; 1.3.4.3 Functional categorisation; 1.3.5 Data visualisation; 1.4 What can we learn from transcript profiles performed in a starchless mutant?
1.5 Conclusion/perspectivesAcknowledgements; References; 2 The use of proteomics in the study of metabolic control; 2.1 Introduction; 2.2 Proteomic methodologies; 2.2.1 Extraction of proteins from plant tissue; 2.2.2 Separation, display and quantification of proteins; 2.2.3 Identification of proteins by mass spectrometry; 2.2.4 Gel-free proteomic approaches; 2.3 Cataloging protein localization; 2.3.1 Localizing proteins to different tissues; 2.3.2 Establishing subcellular protein localization: methodologies; 2.3.3 Mitochondrial and chloroplast proteomes; 2.3.4 Other subcellular proteomes 2.3.5 A stamp of authenticity for the subcellular protein postcode?2.4 Quantitative analyses of the proteome; 2.4.1 Examples of quantitative proteomics; 2.4.2 The use of high-throughput measurements of enzyme activity as a proxy for quantitative proteomics; 2.5 The use of proteomics to investigate post-translational modification of proteins; 2.5.1 Systematic identification of phosphorylated proteins; 2.5.2 Systematic identification of protein redox modifications; 2.6 The use of proteomics to investigate protein-protein interactions; 2.7 Future perspectives; References 3 Study of metabolic control in plants by metabolomics3.1 Introduction; 3.1.1 What is metabolomics?; 3.1.2 Systemic properties in metabolic networks; 3.2 Metabolomic methods; 3.2.1 Historic perspective of plant metabolite analysis; 3.2.2 Modern instrumentation in metabolite analysis; 3.2.3 Sample preparation for metabolomics; 3.2.4 Metabolome coverage; 3.2.4.1 The quest for combining sensitivity and selectivity; 3.2.4.2 Cellular and subcellular metabolomics; 3.2.4.3 Compound identification; 3.2.5 Quality control; 3.3 Metabolomic databases 3.4 Pathways, clusters and networks: applications of plant metabolomics3.4.1 Bioengineering of metabolism; 3.4.2 Plant biochemistry; 3.4.2.1 Pathway analysis; 3.4.2.2 Flux measurements; 3.4.3 Physiological studies; 3.4.4 Plant metabolomic methods; 3.4.5 Food science; 3.5 Outlook; References; 4 Metabolite transporters in the control of plant primary metabolism; 4.1 Introduction; 4.2 Photoassimilation and assimilate transport in source cells; 4.2.1 Carbon assimilation by the reductive pentose-phosphate pathway (Calvin cycle); 4.2.2 The plastidic triose-phosphate pool - a metabolic crossway 4.2.2.1 Communication between the starch and sucrose biosynthetic pathways via TPT |
| Record Nr. | UNINA-9910830159303321 |
| Ames, Iowa, : Blackwell Pub., c2006 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
The plant hormone ethylene [[electronic resource] /] / edited by Michael T. McManus
| The plant hormone ethylene [[electronic resource] /] / edited by Michael T. McManus |
| Pubbl/distr/stampa | Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2012 |
| Descrizione fisica | 1 online resource (434 p.) |
| Disciplina | 571.7/42 |
| Altri autori (Persone) | McManusMichael T |
| Collana | Annual plant reviews |
| Soggetto topico |
Ethylene
Plant hormones |
| ISBN |
1-280-58660-5
9786613616432 1-118-22307-1 1-118-22308-X 1-118-22310-1 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
ANNUAL PLANT REVIEWS VOLUME 44; Contents; List of Contributors; Preface; 1 100 Years of Ethylene - A Personal View; 1.1 Introduction; 1.2 Ethylene biosynthesis; 1.3 Ethylene perception and signalling; 1.4 Differential responses to ethylene; 1.5 Ethylene and development; 1.6 Looking ahead; Acknowledgements; References; 2 Early Events in the Ethylene Biosynthetic Pathway - Regulation of the Pools of Methionine and S-Adenosylmethionine; 2.1 Introduction; 2.2 The metabolism of Met and SAM; 2.3 Regulation of de novo Met synthesis; 2.4 Regulation of the SAM pool
2.4.1 Regulation of SAMS genes by ethylene and of SAMS enzyme activity by protein-S-nitrosylation2.5 The activated methyl cycle; 2.6 The S-methylmethionine cycle; 2.7 The methionine or Yang cycle; 2.7.1 The Yang cycle in relation to polyamine and nicotianamine biosynthesis; 2.7.2 Regulation of the Yang cycle in relation to ethylene synthesis; 2.8 Conclusions; Acknowledgement; References; 3 The Formation of ACC and Competition Between Polyamines and Ethylene for SAM; 3.1 Introduction; 3.2 Identification and characterization of ACC synthase activity in plants; 3.2.1 Historical overview 3.2.2 Purification and properties of the ACC synthase protein3.3 Analysis of ACC synthase at the transcriptional level; 3.3.1 Molecular cloning of ACC synthase genes; 3.3.2 Transcriptional regulation of the ACC synthase gene family; 3.4 Post-transcriptional regulation of ACS; 3.4.1 Identification and characterization of interactions with ETO1; 3.4.2 Regulation of ACS degradation; 3.5 Does ACC act as a signal?; 3.6 Biosynthesis and physiology of polyamines; 3.6.1 SAM is a substrate for polyamines; 3.6.2 Physiology of polyamine effects in vitro and in vivo 3.6.3 Concurrent biosynthesis of ethylene and polyamines3.6.4 Do plant cells invoke a homeostatic regulation of SAM levels?; Acknowledgements; References; 4 The Fate of ACC in Higher Plants; 4.1 Introduction; 4.2 History of the discovery of ACC oxidase as the ethylene-forming enzyme; 4.2.1 Early characterization of ACC oxidase; 4.2.2 Cloning of the ethylene-forming enzyme as an indicator of enzyme activity; 4.2.3 Initial biochemical demonstration of ethylene-forming enzyme activity in vitro; 4.3 Mechanism of the ACC oxidase-catalyzed reaction; 4.3.1 Investigation of the ACO reaction mechanism 4.3.2 Metabolism of HCN4.3.3 Evidence of the conjugation of ACC; 4.4 Transcriptional regulation of ACC oxidase; 4.4.1 ACO multi-gene families; 4.4.2 Differential expression of members of ACO multi-gene families in response to developmental and environmental stimuli; 4.4.3 Transcriptional regulation of ACO gene expression; 4.4.4 Crosstalk between ethylene signalling elements and ACO gene expression; 4.5 Translational regulation of ACC oxidase; 4.6 Evidence that ACC oxidase acts as a control point in ethylene biosynthesis; 4.6.1 Cell-specific expression of ACC oxidase 4.6.2 Differential expression of ACS and ACO genes |
| Record Nr. | UNINA-9910141343003321 |
| Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2012 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
The plant hormone ethylene / / edited by Michael T. McManus
| The plant hormone ethylene / / edited by Michael T. McManus |
| Edizione | [1st ed.] |
| Pubbl/distr/stampa | Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2012 |
| Descrizione fisica | 1 online resource (434 p.) |
| Disciplina | 571.7/42 |
| Altri autori (Persone) | McManusMichael T |
| Collana | Annual plant reviews |
| Soggetto topico |
Ethylene
Plant hormones |
| ISBN |
1-280-58660-5
9786613616432 1-118-22307-1 1-118-22308-X 1-118-22310-1 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
ANNUAL PLANT REVIEWS VOLUME 44; Contents; List of Contributors; Preface; 1 100 Years of Ethylene - A Personal View; 1.1 Introduction; 1.2 Ethylene biosynthesis; 1.3 Ethylene perception and signalling; 1.4 Differential responses to ethylene; 1.5 Ethylene and development; 1.6 Looking ahead; Acknowledgements; References; 2 Early Events in the Ethylene Biosynthetic Pathway - Regulation of the Pools of Methionine and S-Adenosylmethionine; 2.1 Introduction; 2.2 The metabolism of Met and SAM; 2.3 Regulation of de novo Met synthesis; 2.4 Regulation of the SAM pool
2.4.1 Regulation of SAMS genes by ethylene and of SAMS enzyme activity by protein-S-nitrosylation2.5 The activated methyl cycle; 2.6 The S-methylmethionine cycle; 2.7 The methionine or Yang cycle; 2.7.1 The Yang cycle in relation to polyamine and nicotianamine biosynthesis; 2.7.2 Regulation of the Yang cycle in relation to ethylene synthesis; 2.8 Conclusions; Acknowledgement; References; 3 The Formation of ACC and Competition Between Polyamines and Ethylene for SAM; 3.1 Introduction; 3.2 Identification and characterization of ACC synthase activity in plants; 3.2.1 Historical overview 3.2.2 Purification and properties of the ACC synthase protein3.3 Analysis of ACC synthase at the transcriptional level; 3.3.1 Molecular cloning of ACC synthase genes; 3.3.2 Transcriptional regulation of the ACC synthase gene family; 3.4 Post-transcriptional regulation of ACS; 3.4.1 Identification and characterization of interactions with ETO1; 3.4.2 Regulation of ACS degradation; 3.5 Does ACC act as a signal?; 3.6 Biosynthesis and physiology of polyamines; 3.6.1 SAM is a substrate for polyamines; 3.6.2 Physiology of polyamine effects in vitro and in vivo 3.6.3 Concurrent biosynthesis of ethylene and polyamines3.6.4 Do plant cells invoke a homeostatic regulation of SAM levels?; Acknowledgements; References; 4 The Fate of ACC in Higher Plants; 4.1 Introduction; 4.2 History of the discovery of ACC oxidase as the ethylene-forming enzyme; 4.2.1 Early characterization of ACC oxidase; 4.2.2 Cloning of the ethylene-forming enzyme as an indicator of enzyme activity; 4.2.3 Initial biochemical demonstration of ethylene-forming enzyme activity in vitro; 4.3 Mechanism of the ACC oxidase-catalyzed reaction; 4.3.1 Investigation of the ACO reaction mechanism 4.3.2 Metabolism of HCN4.3.3 Evidence of the conjugation of ACC; 4.4 Transcriptional regulation of ACC oxidase; 4.4.1 ACO multi-gene families; 4.4.2 Differential expression of members of ACO multi-gene families in response to developmental and environmental stimuli; 4.4.3 Transcriptional regulation of ACO gene expression; 4.4.4 Crosstalk between ethylene signalling elements and ACO gene expression; 4.5 Translational regulation of ACC oxidase; 4.6 Evidence that ACC oxidase acts as a control point in ethylene biosynthesis; 4.6.1 Cell-specific expression of ACC oxidase 4.6.2 Differential expression of ACS and ACO genes |
| Record Nr. | UNINA-9910821418003321 |
| Chichester, West Sussex ; ; Ames, Iowa, : Wiley-Blackwell, 2012 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||