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The handbook of plant genome mapping : genetic and physical mapping / / edited by Khalid Meksem and Gunter Kahl
| The handbook of plant genome mapping : genetic and physical mapping / / edited by Khalid Meksem and Gunter Kahl |
| Pubbl/distr/stampa | Weinheim, : Wiley-VCH, c2005 |
| Descrizione fisica | 1 online resource (404 p.) |
| Disciplina |
572.862
581.35015118 |
| Altri autori (Persone) |
MeksemKhalid
KahlGunter |
| Soggetto topico |
Plant genome mapping
Botany |
| ISBN |
1-280-51974-6
9786610519743 3-527-60351-4 3-527-60443-X |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
The Handbook of Plant Genome Mapping; Preface; Contents; List of Contributors; Part I Genetic Mapping; 1 Mapping Populations and Principles of Genetic Mapping; Overview; Abstract; 1.1 Introduction; 1.2 Mapping Populations; 1.2.1 Mapping Populations Suitable for Self-fertilizing Plants; 1.2.1.1 F(2) Populations; 1.2.1.2 Recombinant Inbred Lines; 1.2.1.3 Backcross Populations; 1.2.1.4 Introgression Lines: Exotic Libraries; 1.2.1.5 Doubled Haploid Lines; 1.2.2 Mapping Populations for Cross-pollinating Species; 1.2.3 Two-step Strategies for Mapping Mutants and DNA Fragments
1.2.4 Chromosome-specific Tools for Mapping1.2.5 Mapping in Natural Populations/Breeding Pools; 1.2.6 Mapping Genes and Mutants to Physically Aligned DNA; 1.2.7 Specific Mapping Problems; 1.3 Discussion; Acknowledgments; References; 2 Molecular Marker Systems for Genetic Mapping; Abstract; 2.1 Introduction; 2.2 DNA-based Markers Popularly Used in Genetic Mapping; 2.2.1 RFLP; 2.2.1.1 Conventional RFLP Analysis; 2.2.1.2 PCR-RFLP; 2.2.1.3 Mismatch PCR-RFLP; 2.2.2 RAPD; 2.2.3 SSR Markers; 2.2.3.1 Conventional SSR Analysis; 2.2.3.2 ISSR; 2.2.3.3 STMP; 2.2.4 AFLP; 2.2.4.1 Conventional AFLP Analysis 2.2.4.2 f-AFLP2.2.4.3 cDNA-AFLP and HiCEP; 2.2.4.4 TE-AFLP; 2.2.4.5 MEGA-AFLP; 2.2.4.6 MITE-AFLPs; 2.2.4.7 AFLP Conversion; 2.2.5 REMAP and IRAP; 2.2.5.1 IRAP; 2.2.5.2 REMAP; 2.2.6 SRAP; 2.3 Discussion; References; 3 Methods and Software for Genetic Mapping; Overview; Abstract; 3.1 Introduction; 3.1.1 Methods and Tools for Genetic Linkage Mapping in Plants; 3.1.1.1 Statement of the Problem; 3.1.2 Locus Grouping; 3.1.3 Locus Ordering; 3.1.4 Multilocus Distance Estimation; 3.1.5 Using Variant and Mixed Cross Designs; 3.1.5.1 Outbreeding Species; 3.1.5.2 Autopolyploid Species 3.1.5.3 Combining Datasets3.1.6 Linkage-mapping Software Availability, Interfaces, and Features; 3.2 Methods and Tools for QTL Mapping in Plants; 3.2.1 Statement of the Problem; 3.2.2 Single-marker Association; 3.2.2.1 Metric Traits; 3.2.2.2 Categorical Traits; 3.2.3 Interval Mapping: Simple (SIM); 3.2.3.1 ML Methods; 3.2.3.2 Least-squares (Regression) and Nonparametric Methods; 3.2.4 Interval Mapping: Composite (CIM); 3.2.5 Significance Testing; 3.2.6 Interval Mapping: Multiple-QTL Model Building; 3.2.6.1 Stepwise and Exhaustive-search Methods for Building Multiple-QTL Models 3.2.6.2 Markov Chain Monte Carlo (MCMC) Methods3.2.6.3 Genetic Algorithms; 3.2.7 Multiple-trait (MT) QTL Mapping; 3.2.8 Multiple-cross (MC) QTL Mapping; 3.2.9 Computational Optimization Methods; 3.3 Future Directions in Mapping Methods and Tools; 3.3.1 Future of Linkage and QTL Mapping; 3.3.2 Adequacy of Software Tools for Plant Mapping; 3.3.2.1 Software Merit Criteria; 3.3.2.2 Analytical Scope; 3.3.2.3 Ease of Learning and Use; 3.3.2.4 Accessibility and Extensibility; 3.3.3 A Development Model for Public Genetic Mapping Software; References 4 Single nucleotide Polymorphisms: Detection Techniques and Their Potential for Genotyping and Genome Mapping |
| Record Nr. | UNINA-9910677960703321 |
| Weinheim, : Wiley-VCH, c2005 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
The handbook of plant mutation screening : mining of natural and induced alleles / / edited by Khalid Meksem, Gunter Kahl
| The handbook of plant mutation screening : mining of natural and induced alleles / / edited by Khalid Meksem, Gunter Kahl |
| Pubbl/distr/stampa | Weinheim, : Wiley-VCH, c2010 |
| Descrizione fisica | 1 online resource (463 p.) |
| Disciplina | 631.53 |
| Altri autori (Persone) |
MeksemKhalid
KahlGunter |
| Collana | Molecular Plant Biology |
| Soggetto topico |
Plant mutation breeding
Allelomorphism |
| ISBN |
1-282-45668-7
9786612456688 3-527-62939-4 3-527-62940-8 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
The Handbook of Plant Mutation Screening: Mining of Natural and Induced Alleles; Contents; Preface; List of Contributors; Abbreviations; Part I Induced Mutations; 1 Physically Induced Mutation: Ion Beam Mutagenesis; 2 Ds Transposon Mutant Lines for Saturation Mutagenesis of the Arabidopsis genome; 3 Use of Mutants from T-DNA Insertion Populations Generated by High-Throughput Screening; 4 Making Mutations is an Active Process: Methods to Examine DNA Polymerase Errors; 5 Tnt1 Induced Mutations in Medicago: Characterization and Applications; Part II Mutation Discovery
6 Mutation Discovery with the Illumina Genome Analyzer7 Chemical Methods for Mutation Detection: The Chemical Cleavage of Mismatch Method; 8 Mutation Detection in Plants by Enzymatic Mismatch Cleavage; 9 Mutation Scanning and Genotyping in Plants by High-Resolution DNA Melting; 10 In Silico Methods: Mutation Detection Software for Sanger Sequencing, Genome and Fragment Analysis; Part III High-Throughput Screening Methods; 11 Use of TILLING for Reverse and Forward Genetics of Rice; 12 Sequencing-Based Screening of Mutations and Natural Variation using the KeyPointTM Technology Part IV Applications in Plant Breeding13 Natural and Induced Mutants of Barley: Single Nucleotide Polymorphisms in Genes Important for Breeding; 14 Association Mapping for the Exploration of Genetic Diversity and Identification of Useful Loci for Plant Breeding; 15 Using Mutations in Corn Breeding Programs; 16 Gene Targeting as a Precise Tool for Plant Mutagenesis; Part V Emerging Technologies; 17 True Single Molecule Sequencing (tSMS)TM by Synthesis; 18 High-Throughput Sequencing by Hybridization; 19 DNA Sequencing-by-Synthesis using Novel Nucleotide Analogs 20 Emerging Technologies: Nanopore Sequencing for Mutation DetectionGlossary; Index |
| Record Nr. | UNINA-9910876743903321 |
| Weinheim, : Wiley-VCH, c2010 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||