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Algorithms in bioinformatics : 7th International Workshop, WABI 2007, Philadelphia, PA, USA, September 8-9, 2007, proceedings / / Raffaele Giancarlo, Sridhar Hannenhalli (Eds.)
| Algorithms in bioinformatics : 7th International Workshop, WABI 2007, Philadelphia, PA, USA, September 8-9, 2007, proceedings / / Raffaele Giancarlo, Sridhar Hannenhalli (Eds.) |
| Edizione | [1st ed. 2007.] |
| Pubbl/distr/stampa | Berlin ; ; Heidelberg : , : Springer, , [2007] |
| Descrizione fisica | 1 online resource (XIII, 434 p.) |
| Disciplina | 005.1 |
| Collana | Lecture Notes in Bioinformatics |
| Soggetto topico | Computer programming |
| ISBN | 3-540-74126-7 |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Shotgun Protein Sequencing -- Locality Kernels for Protein Classification -- When Less Is More: Improving Classification of Protein Families with a Minimal Set of Global Features -- Fault Tolerance for Large Scale Protein 3D Reconstruction from Contact Maps -- Bringing Folding Pathways into Strand Pairing Prediction -- A Fast and Accurate Heuristic for the Single Individual SNP Haplotyping Problem with Many Gaps, High Reading Error Rate and Low Coverage -- Two Birds, One Stone: Selecting Functionally Informative Tag SNPs for Disease Association Studies -- Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity -- Haplotype Inference Via Hierarchical Genotype Parsing -- Seeded Tree Alignment and Planar Tanglegram Layout -- Inferring Models of Rearrangements, Recombinations, and Horizontal Transfers by the Minimum Evolution Criterion -- An ?(n 2/logn) Speed-Up of Heuristics for the Gene-Duplication Problem -- Incremental Discovery of Irredundant Motif Bases in Time O(|?|n 2 logn) -- A Graph Clustering Approach to Weak Motif Recognition -- Informative Motifs in Protein Family Alignments -- Topology Independent Protein Structural Alignment -- Generalized Pattern Search and Mesh Adaptive Direct Search Algorithms for Protein Structure Prediction -- Alignment-Free Local Structural Search by Writhe Decomposition -- Defining and Computing Optimum RMSD for Gapped Multiple Structure Alignment -- Using Protein Domains to Improve the Accuracy of Ab Initio Gene Finding -- Genomic Signatures in De Bruijn Chains -- Fast Kernel Methods for SVM Sequence Classifiers -- On-Line Viterbi Algorithm for Analysis of Long Biological Sequences -- Predicting Protein Folding Kinetics Via Temporal Logic Model Checking -- Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops -- Algorithms for the Extraction of Synteny Blocks from Comparative Maps -- Computability of Models for Sequence Assembly -- Fast Algorithms for Selecting Specific siRNA in Complete mRNA Data -- RNA Folding Including Pseudoknots: A New Parameterized Algorithm and Improved Upper Bound -- HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding -- Homology Search with Fragmented Nucleic Acid Sequence Patterns -- Fast Computation of Good Multiple Spaced Seeds -- Inverse Sequence Alignment from Partial Examples -- Novel Approaches in Psychiatric Genomics -- The Point Placement Problem on a Line – Improved Bounds for Pairwise Distance Queries -- Efficient Computational Design of Tiling Arrays Using a Shortest Path Approach -- Efficient and Accurate Construction of Genetic Linkage Maps from Noisy and Missing Genotyping Data -- A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence -- Composing Globally Consistent Pathway Parameter Estimates Through Belief Propagation. |
| Record Nr. | UNISA-996466337103316 |
| Berlin ; ; Heidelberg : , : Springer, , [2007] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. di Salerno | ||
| ||
Algorithms in bioinformatics : 7th International Workshop, WABI 2007, Philadelphia, PA, USA, September 8-9, 2007, proceedings / / Raffaele Giancarlo, Sridhar Hannenhalli (Eds.)
| Algorithms in bioinformatics : 7th International Workshop, WABI 2007, Philadelphia, PA, USA, September 8-9, 2007, proceedings / / Raffaele Giancarlo, Sridhar Hannenhalli (Eds.) |
| Edizione | [1st ed. 2007.] |
| Pubbl/distr/stampa | Berlin ; ; Heidelberg : , : Springer, , [2007] |
| Descrizione fisica | 1 online resource (XIII, 434 p.) |
| Disciplina | 005.1 |
| Collana | Lecture Notes in Bioinformatics |
| Soggetto topico | Computer programming |
| ISBN | 3-540-74126-7 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Shotgun Protein Sequencing -- Locality Kernels for Protein Classification -- When Less Is More: Improving Classification of Protein Families with a Minimal Set of Global Features -- Fault Tolerance for Large Scale Protein 3D Reconstruction from Contact Maps -- Bringing Folding Pathways into Strand Pairing Prediction -- A Fast and Accurate Heuristic for the Single Individual SNP Haplotyping Problem with Many Gaps, High Reading Error Rate and Low Coverage -- Two Birds, One Stone: Selecting Functionally Informative Tag SNPs for Disease Association Studies -- Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity -- Haplotype Inference Via Hierarchical Genotype Parsing -- Seeded Tree Alignment and Planar Tanglegram Layout -- Inferring Models of Rearrangements, Recombinations, and Horizontal Transfers by the Minimum Evolution Criterion -- An ?(n 2/logn) Speed-Up of Heuristics for the Gene-Duplication Problem -- Incremental Discovery of Irredundant Motif Bases in Time O(|?|n 2 logn) -- A Graph Clustering Approach to Weak Motif Recognition -- Informative Motifs in Protein Family Alignments -- Topology Independent Protein Structural Alignment -- Generalized Pattern Search and Mesh Adaptive Direct Search Algorithms for Protein Structure Prediction -- Alignment-Free Local Structural Search by Writhe Decomposition -- Defining and Computing Optimum RMSD for Gapped Multiple Structure Alignment -- Using Protein Domains to Improve the Accuracy of Ab Initio Gene Finding -- Genomic Signatures in De Bruijn Chains -- Fast Kernel Methods for SVM Sequence Classifiers -- On-Line Viterbi Algorithm for Analysis of Long Biological Sequences -- Predicting Protein Folding Kinetics Via Temporal Logic Model Checking -- Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops -- Algorithms for the Extraction of Synteny Blocks from Comparative Maps -- Computability of Models for Sequence Assembly -- Fast Algorithms for Selecting Specific siRNA in Complete mRNA Data -- RNA Folding Including Pseudoknots: A New Parameterized Algorithm and Improved Upper Bound -- HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding -- Homology Search with Fragmented Nucleic Acid Sequence Patterns -- Fast Computation of Good Multiple Spaced Seeds -- Inverse Sequence Alignment from Partial Examples -- Novel Approaches in Psychiatric Genomics -- The Point Placement Problem on a Line – Improved Bounds for Pairwise Distance Queries -- Efficient Computational Design of Tiling Arrays Using a Shortest Path Approach -- Efficient and Accurate Construction of Genetic Linkage Maps from Noisy and Missing Genotyping Data -- A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence -- Composing Globally Consistent Pathway Parameter Estimates Through Belief Propagation. |
| Record Nr. | UNINA-9910768162703321 |
| Berlin ; ; Heidelberg : , : Springer, , [2007] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
Combinatorial Pattern Matching [[electronic resource] ] : 22nd Annual Symposium, CPM 2011, Palermo, Italy, June 27-29, 2011, Proceedings / / edited by Raffaele Giancarlo, Giovanni Manzini
| Combinatorial Pattern Matching [[electronic resource] ] : 22nd Annual Symposium, CPM 2011, Palermo, Italy, June 27-29, 2011, Proceedings / / edited by Raffaele Giancarlo, Giovanni Manzini |
| Edizione | [1st ed. 2011.] |
| Pubbl/distr/stampa | Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2011 |
| Descrizione fisica | 1 online resource (XV, 480 p. 125 illus., 10 illus. in color.) |
| Disciplina | 511/.6 |
| Collana | Theoretical Computer Science and General Issues |
| Soggetto topico |
Algorithms
Artificial intelligence—Data processing Data mining Pattern recognition systems Bioinformatics Data Science Data Mining and Knowledge Discovery Automated Pattern Recognition Computational and Systems Biology |
| ISBN | 3-642-21458-4 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Record Nr. | UNISA-996465417603316 |
| Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2011 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. di Salerno | ||
| ||
Combinatorial Pattern Matching [[electronic resource] ] : 11th Annual Symposium. CPM 2000, Montreal, Canada, June 21-23, 2000, Proceedings / / edited by Raffaele Giancarlo, David Sankoff
| Combinatorial Pattern Matching [[electronic resource] ] : 11th Annual Symposium. CPM 2000, Montreal, Canada, June 21-23, 2000, Proceedings / / edited by Raffaele Giancarlo, David Sankoff |
| Edizione | [1st ed. 2000.] |
| Pubbl/distr/stampa | Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2000 |
| Descrizione fisica | 1 online resource (XI, 426 p.) |
| Disciplina | 006.4 |
| Collana | Lecture Notes in Computer Science |
| Soggetto topico |
Pattern recognition
Computers Algorithms Natural language processing (Computer science) Information storage and retrieval Combinatorics Pattern Recognition Theory of Computation Algorithm Analysis and Problem Complexity Natural Language Processing (NLP) Information Storage and Retrieval |
| ISBN | 3-540-45123-4 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Invited Lectures -- Identifying and Filtering Near-Duplicate Documents -- Machine Learning for Efficient Natural-Language Processing -- Browsing around a Digital Library: Today and Tomorrow -- Summer School Lectures -- Algorithmic Aspects of Speech Recognition: A Synopsis -- Some Results on Flexible-Pattern Discovery -- Contributed Papers -- Explaining and Controlling Ambiguity in Dynamic Programming -- A Dynamic Edit Distance Table -- Parametric Multiple Sequence Alignment and Phylogeny Construction -- Tsukuba BB: A Branch and Bound Algorithm for Local Multiple Sequence Alignment -- A Polynomial Time Approximation Scheme for the Closest Substring Problem -- Approximation Algorithms for Hamming Clustering Problems -- Approximating the Maximum Isomorphic Agreement Subtree Is Hard -- A Faster and Unifying Algorithm for Comparing Trees -- Incomplete Directed Perfect Phylogeny -- The Longest Common Subsequence Problem for Arc-Annotated Sequences -- Boyer—Moore String Matching over Ziv-Lempel Compressed Text -- A Boyer—Moore Type Algorithm for Compressed Pattern Matching -- Approximate String Matching over Ziv—Lempel Compressed Text -- Improving Static Compression Schemes by Alphabet Extension -- Genome Rearrangement by Reversals and Insertions/Deletions of Contiguous Segments -- A Lower Bound for the Breakpoint Phylogeny Problem -- Structural Properties and Tractability Results for Linear Synteny -- Shift Error Detection in Standardized Exams -- An Upper Bound for Number of Contacts in the HP-Model on the Face-Centered-Cubic Lattice (FCC) -- The Combinatorial Partitioning Method -- Compact Suffix Array -- Linear Bidirectional On-Line Construction of Affix Trees -- Using Suffix Trees for Gapped Motif Discovery -- Indexing Text with Approximate q-Grams -- Simple Optimal String Matching Algorithm -- Exact and Efficient Computation of the Expected Number of Missing and Common Words in Random Texts -- Periods and Quasiperiods Characterization -- Finding Maximal Quasiperiodicities in Strings -- On the Complexity of Determining the Period of a String. |
| Record Nr. | UNISA-996465871703316 |
| Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2000 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. di Salerno | ||
| ||
Combinatorial Pattern Matching : 11th Annual Symposium. CPM 2000, Montreal, Canada, June 21-23, 2000, Proceedings / / edited by Raffaele Giancarlo, David Sankoff
| Combinatorial Pattern Matching : 11th Annual Symposium. CPM 2000, Montreal, Canada, June 21-23, 2000, Proceedings / / edited by Raffaele Giancarlo, David Sankoff |
| Edizione | [1st ed. 2000.] |
| Pubbl/distr/stampa | Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2000 |
| Descrizione fisica | 1 online resource (XI, 426 p.) |
| Disciplina | 006.4 |
| Collana | Lecture Notes in Computer Science |
| Soggetto topico |
Pattern perception
Computers Algorithms Natural language processing (Computer science) Information storage and retrieval Combinatorial analysis Pattern Recognition Theory of Computation Algorithm Analysis and Problem Complexity Natural Language Processing (NLP) Information Storage and Retrieval Combinatorics |
| ISBN | 3-540-45123-4 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Invited Lectures -- Identifying and Filtering Near-Duplicate Documents -- Machine Learning for Efficient Natural-Language Processing -- Browsing around a Digital Library: Today and Tomorrow -- Summer School Lectures -- Algorithmic Aspects of Speech Recognition: A Synopsis -- Some Results on Flexible-Pattern Discovery -- Contributed Papers -- Explaining and Controlling Ambiguity in Dynamic Programming -- A Dynamic Edit Distance Table -- Parametric Multiple Sequence Alignment and Phylogeny Construction -- Tsukuba BB: A Branch and Bound Algorithm for Local Multiple Sequence Alignment -- A Polynomial Time Approximation Scheme for the Closest Substring Problem -- Approximation Algorithms for Hamming Clustering Problems -- Approximating the Maximum Isomorphic Agreement Subtree Is Hard -- A Faster and Unifying Algorithm for Comparing Trees -- Incomplete Directed Perfect Phylogeny -- The Longest Common Subsequence Problem for Arc-Annotated Sequences -- Boyer—Moore String Matching over Ziv-Lempel Compressed Text -- A Boyer—Moore Type Algorithm for Compressed Pattern Matching -- Approximate String Matching over Ziv—Lempel Compressed Text -- Improving Static Compression Schemes by Alphabet Extension -- Genome Rearrangement by Reversals and Insertions/Deletions of Contiguous Segments -- A Lower Bound for the Breakpoint Phylogeny Problem -- Structural Properties and Tractability Results for Linear Synteny -- Shift Error Detection in Standardized Exams -- An Upper Bound for Number of Contacts in the HP-Model on the Face-Centered-Cubic Lattice (FCC) -- The Combinatorial Partitioning Method -- Compact Suffix Array -- Linear Bidirectional On-Line Construction of Affix Trees -- Using Suffix Trees for Gapped Motif Discovery -- Indexing Text with Approximate q-Grams -- Simple Optimal String Matching Algorithm -- Exact and Efficient Computation of the Expected Number of Missing and Common Words in Random Texts -- Periods and Quasiperiods Characterization -- Finding Maximal Quasiperiodicities in Strings -- On the Complexity of Determining the Period of a String. |
| Record Nr. | UNINA-9910143628703321 |
| Berlin, Heidelberg : , : Springer Berlin Heidelberg : , : Imprint : Springer, , 2000 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||