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10th International Conference on Practical Applications of Computational Biology & Bioinformatics / / edited by Mohd Saberi Mohamad, Miguel P. Rocha, Florentino Fdez-Riverola, Francisco J. Domínguez Mayo, Juan F. De Paz
| 10th International Conference on Practical Applications of Computational Biology & Bioinformatics / / edited by Mohd Saberi Mohamad, Miguel P. Rocha, Florentino Fdez-Riverola, Francisco J. Domínguez Mayo, Juan F. De Paz |
| Edizione | [1st ed. 2016.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2016 |
| Descrizione fisica | 1 online resource |
| Disciplina | 570.285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Computational Intelligence Artificial Intelligence Computational Biology/Bioinformatics |
| ISBN | 3-319-40126-2 |
| Formato | Materiale a stampa  |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Data And Text Mining -- Gene Expression -- Genomics -- Systems Biology. |
| Record Nr. | UNINA-9910254228103321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2016 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
11th International Conference on Practical Applications of Computational Biology & Bioinformatics / / edited by Florentino Fdez-Riverola, Mohd Saberi Mohamad, Miguel Rocha, Juan F. De Paz, Tiago Pinto
| 11th International Conference on Practical Applications of Computational Biology & Bioinformatics / / edited by Florentino Fdez-Riverola, Mohd Saberi Mohamad, Miguel Rocha, Juan F. De Paz, Tiago Pinto |
| Edizione | [1st ed. 2017.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2017 |
| Descrizione fisica | 1 online resource (XIV, 330 p. 97 illus.) |
| Disciplina | 570.285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Computational Intelligence Artificial Intelligence Computational Biology/Bioinformatics |
| ISBN | 3-319-60816-9 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Processing 2D gel electrophoresis images for efficient Gaussian mixture modeling -- Development of text mining tools for information retrieval from patents -- Multidimensional Feature Selection and Interaction Mining with Decision Tree based ensemble methods -- Study of the Epigenetic Signals in the Human Genome -- An Ensemble Approach for Gene Selection in Gene Expression Data -- Dissimilar Symmetric Word Pairs in the Human Genome. |
| Record Nr. | UNINA-9910254312903321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2017 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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8th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB 2014) / / edited by Julio Saez-Rodriguez, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz Santana
| 8th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB 2014) / / edited by Julio Saez-Rodriguez, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz Santana |
| Edizione | [1st ed. 2014.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2014 |
| Descrizione fisica | 1 online resource (298 p.) |
| Disciplina | 570.285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Computational Intelligence Artificial Intelligence Computational Biology/Bioinformatics |
| ISBN | 3-319-07581-0 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | Applications -- Data Analysis and Mining -- Proteins -- Sequence Analysis -- Systems Biology -- Text Mining. |
| Record Nr. | UNINA-9910299758303321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2014 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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9th International Conference on Practical Applications of Computational Biology and Bioinformatics [[electronic resource] /] / edited by Ross Overbeek, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz
| 9th International Conference on Practical Applications of Computational Biology and Bioinformatics [[electronic resource] /] / edited by Ross Overbeek, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz |
| Edizione | [1st ed. 2015.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2015 |
| Descrizione fisica | 1 online resource |
| Disciplina | 572.80285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Chemoinformatics Computational Intelligence Artificial Intelligence Computational Biology/Bioinformatics Computer Applications in Chemistry |
| ISBN |
3-319-19775-4
3-319-19776-2 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | A Preliminary Assessment of Three Strategies for the Agent-Based Modeling of Bacterial Conjugation -- Carotenoid Analysis of Cassava Genotypes Roots (Manihot Esculenta Crantz) Cultivated in Southern Brazil Using Chemometric Tools -- UV-Visible Scanning Spectrophotometry and Chemometric Analysis As Tools to Build Descriptive And Classification Models for Propolis from Southern Brazil -- UV-Visible Spectrophotometry-Based Metabolomic Analysis of Cedrela Fissilis Velozzo (Meliaceae) Calluses - A Screening Tool for Culture Medium Composition and Cell Metabolic Profiles -- An Integrated Computational Platform for Metabolomics Data Analysis -- Compound Identification in Comprehensive Gas Chromatography - Mass Spectrometry-Based Metabolomics by Blind Source Separation -- Dolphin 1D: Improving Automation of Targeted Metabolomics in Multi-Matrix Datasets Of 1H-NMR Spectra -- A New Dimensionality Reduction Technique Based On HMM for Boosting Document Classification -- Diagnostic Knowledge Extraction from Medlineplus: An Application for Infectious Diseases -- A Text Mining Approach for the Extraction Of Kinetic Information from Literature -- A Novel Search Engine Supporting Specific Drug Queries And Literature Management -- Ganoderma Australe Transcriptome Analysis with Hidden Markov Model And Bayesian Inference Approaches -- A New Bioinformatic Pipeline to Address The Most Common Requirements in RNA-Seq Data Analysis -- Microarray Gene Expression Data Integration: An Application to Brain Tumor Grade Determination -- Obtaining Relevant Genes by Analysis of Expression Arrays with a Multi-Agent System. |
| Record Nr. | UNINA-9910299817803321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2015 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
| ||
9th International Conference on Practical Applications of Computational Biology and Bioinformatics / / edited by Ross Overbeek, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz
| 9th International Conference on Practical Applications of Computational Biology and Bioinformatics / / edited by Ross Overbeek, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz |
| Edizione | [1st ed. 2015.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2015 |
| Descrizione fisica | 1 online resource |
| Disciplina | 572.80285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Chemoinformatics Computational Intelligence Artificial Intelligence Computational Biology/Bioinformatics Computer Applications in Chemistry |
| ISBN |
3-319-19775-4
3-319-19776-2 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | A Preliminary Assessment of Three Strategies for the Agent-Based Modeling of Bacterial Conjugation -- Carotenoid Analysis of Cassava Genotypes Roots (Manihot Esculenta Crantz) Cultivated in Southern Brazil Using Chemometric Tools -- UV-Visible Scanning Spectrophotometry and Chemometric Analysis As Tools to Build Descriptive And Classification Models for Propolis from Southern Brazil -- UV-Visible Spectrophotometry-Based Metabolomic Analysis of Cedrela Fissilis Velozzo (Meliaceae) Calluses - A Screening Tool for Culture Medium Composition and Cell Metabolic Profiles -- An Integrated Computational Platform for Metabolomics Data Analysis -- Compound Identification in Comprehensive Gas Chromatography - Mass Spectrometry-Based Metabolomics by Blind Source Separation -- Dolphin 1D: Improving Automation of Targeted Metabolomics in Multi-Matrix Datasets Of 1H-NMR Spectra -- A New Dimensionality Reduction Technique Based On HMM for Boosting Document Classification -- Diagnostic Knowledge Extraction from Medlineplus: An Application for Infectious Diseases -- A Text Mining Approach for the Extraction Of Kinetic Information from Literature -- A Novel Search Engine Supporting Specific Drug Queries And Literature Management -- Ganoderma Australe Transcriptome Analysis with Hidden Markov Model And Bayesian Inference Approaches -- A New Bioinformatic Pipeline to Address The Most Common Requirements in RNA-Seq Data Analysis -- Microarray Gene Expression Data Integration: An Application to Brain Tumor Grade Determination -- Obtaining Relevant Genes by Analysis of Expression Arrays with a Multi-Agent System. |
| Record Nr. | UNINA-9910746084003321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2015 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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Practical Applications of Computational Biology and Bioinformatics, 12th International Conference / / edited by Florentino Fdez-Riverola, Mohd Saberi Mohamad, Miguel Rocha, Juan F. De Paz, Pascual González
| Practical Applications of Computational Biology and Bioinformatics, 12th International Conference / / edited by Florentino Fdez-Riverola, Mohd Saberi Mohamad, Miguel Rocha, Juan F. De Paz, Pascual González |
| Edizione | [1st ed. 2019.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2019 |
| Descrizione fisica | 1 online resource (239 pages) |
| Disciplina | 570.285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Computational Intelligence Artificial Intelligence |
| ISBN | 3-319-98702-X |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Record Nr. | UNINA-9910484295203321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2019 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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Practical Applications of Computational Biology and Bioinformatics, 13th International Conference / / edited by Florentino Fdez-Riverola, Miguel Rocha, Mohd Saberi Mohamad, Nazar Zaki, José A. Castellanos-Garzón
| Practical Applications of Computational Biology and Bioinformatics, 13th International Conference / / edited by Florentino Fdez-Riverola, Miguel Rocha, Mohd Saberi Mohamad, Nazar Zaki, José A. Castellanos-Garzón |
| Edizione | [1st ed. 2020.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2020 |
| Descrizione fisica | 1 online resource (198 pages) : illustrations |
| Disciplina | 570.285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Computational intelligence
Artificial intelligence Bioinformatics Computational Intelligence Artificial Intelligence |
| ISBN | 3-030-23873-3 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto | ProtRet: A Web Server for Retrieving Proteins in a Functional Complex -- Proposal of a new bioinformatics pipeline for metataxonomics in precision medicine -- Systems toxicology approach to unravel early indicators of squamous cell carcinoma rate in rat nasal epithelium induced by formaldehyde exposure -- Moment Vector Encoding of Protein Sequences for Supervised Classification -- A Hybrid of Particle Swarm Optimization and Minimization of Metabolic Adjustment For Ethanol production of Escherichia Coli. |
| Record Nr. | UNINA-9910483913803321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2020 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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Practical applications of computational biology and bioinformatics, 14th International Conference (PACBB 2020) / / editors, Gabriella Panuccio [et al.]
| Practical applications of computational biology and bioinformatics, 14th International Conference (PACBB 2020) / / editors, Gabriella Panuccio [et al.] |
| Edizione | [1st edition 2021.] |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing : , : Imprint : Springer, , 2021 |
| Descrizione fisica | 1 online resource (231 pages) |
| Disciplina | 570.285 |
| Collana | Advances in Intelligent Systems and Computing |
| Soggetto topico |
Bioinformatics
Computational biology |
| ISBN | 3-030-54568-7 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Record Nr. | UNINA-9910483168603321 |
| Cham : , : Springer International Publishing : , : Imprint : Springer, , 2021 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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Practical Applications of Computational Biology and Bioinformatics, 15th International Conference (PACBB 2021)
| Practical Applications of Computational Biology and Bioinformatics, 15th International Conference (PACBB 2021) |
| Autore | Rocha Miguel |
| Pubbl/distr/stampa | Cham : , : Springer International Publishing AG, , 2021 |
| Descrizione fisica | 1 online resource (188 pages) |
| Altri autori (Persone) |
Fdez-RiverolaFlorentino
MohamadMohd Saberi Casado-VaraRoberto |
| Collana | Lecture Notes in Networks and Systems Ser. |
| Soggetto genere / forma | Electronic books. |
| ISBN | 3-030-86258-5 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Altri titoli varianti | Practical Applications of Computational Biology & Bioinformatics, 15th International Conference |
| Record Nr. | UNINA-9910497093203321 |
Rocha Miguel
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| Cham : , : Springer International Publishing AG, , 2021 | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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Practical applications of computational biology and bioinformatics, 16th international conference (PACBB 2022) / / Florentino Fdez-Riverola [and four others] editors
| Practical applications of computational biology and bioinformatics, 16th international conference (PACBB 2022) / / Florentino Fdez-Riverola [and four others] editors |
| Pubbl/distr/stampa | Cham, Switzerland : , : Springer, , [2023] |
| Descrizione fisica | 1 online resource (122 pages) |
| Disciplina | 570.285 |
| Collana | Lecture notes in networks and systems |
| Soggetto topico |
Bioinformatics
Computational biology |
| ISBN | 3-031-17024-5 |
| Formato | Materiale a stampa |
| Livello bibliografico | Monografia |
| Lingua di pubblicazione | eng |
| Nota di contenuto |
Intro -- Preface -- Acknowledgements -- Organization -- Contents -- TooT-BERT-T: A BERT Approach on Discriminating Transport Proteins from Non-transport Proteins -- 1 Introduction -- 2 Related Work -- 3 Materials and Methods -- 3.1 Dataset -- 3.2 Protein Sequence Representation -- 3.3 Fine-Tuning a BERT Model -- 3.4 Logistic Regression -- 3.5 Evaluation -- 3.6 Evaluation Metrics -- 4 Results and Discussion -- 4.1 Fine-Tuning ProtBERT-BFD and MembraneBERT -- 4.2 Logistic Regression with Fine-Tuned ProtBERT-BFD -- 4.3 Comparison of TooT-BERT-T with State-of-the-Art Models -- 5 Conclusion -- References -- Machine Learning and Deep Learning Techniques for Epileptic Seizures Prediction: A Brief Review -- 1 Introduction -- 2 Signal Processing and Feature Extraction -- 2.1 Feature Extraction -- 2.2 Feature Selection -- 3 Seizure Detection and Classification -- 4 Seizure Prediction -- 4.1 Animal Models -- 4.2 Human Subjects -- 5 Conclusion -- References -- The Covid-19 Decision Support System (C19DSS) - A Mobile App -- 1 Introduction -- 2 Background -- 3 C19DSS -- 3.1 Architecture -- 3.2 Usability Evaluation -- 3.3 Preliminary Use -- 4 Discussion -- 5 Conclusions -- References -- Towards a Flexible and Portable Workflow for Analyzing miRNA-Seq Neuropsychiatric Data: An Initial Replicability Assessment -- 1 Introduction -- 2 Materials and Methods -- 2.1 Data Acquisition -- 2.2 myBrain-Seq Implementation -- 2.3 Experimental Setup -- 3 Results and Discussion -- 3.1 Quality Control -- 3.2 Application of the Same Statistical Thresholds as the Original Articles -- 3.3 Comparison Between the Original Results, MiARma-Seq Results and MyBrain-Seq Results -- 4 Conclusion -- References -- The NAD Interactome, Identification of Putative New NAD-Binding Proteins -- 1 Introduction -- 2 Methods -- 2.1 Data Collection and Definition of Protein Datasets.
2.2 Datasets Analysis -- 2.3 Identification of Putative New NAD-Binding Proteins -- 3 Results -- 3.1 NAD-Binding Proteins (NADBPs) Dataset -- 3.2 NAD-Protein-Protein Interactions (NAD-PPIs) Dataset -- 3.3 Pathway Enrichment Analysis -- 3.4 Characterization of Protein Domains of the NADBPs Dataset -- 3.5 Identification of Putative NAD-Binding Proteins -- 4 Discussion -- 5 Conclusion -- References -- Multiple Instance Learning Based on Mol2vec Molecular Substructure Embeddings for Discovery of NDM-1 Inhibitors -- 1 Introduction -- 2 Materials and Methods -- 2.1 Dataset Collection -- 2.2 Labeling the Database -- 2.3 Calculating Mol2vec Embeddings -- 2.4 Classification and Ranking Frame Work -- 3 Results and Discussion -- 3.1 Results -- 4 Conclusion -- References -- Towards Improving Bio-Image Segmentation Quality Through Ensemble Post-processing of Deep Learning and Classical 3D Segmentation Pipelines -- 1 Introduction -- 2 Previous Research on Ensemble Methods for Segmentation -- 3 Methodology -- 3.1 3D Segmentation Pipelines -- 3.2 Dataset -- 3.3 Fusion Algorithm 1: Label Set Intersection -- 3.4 Fusion Algorithm 2: Region Adjacency Graphs -- 3.5 Fusion Algorithm 3: Boundary Fusion with 3D Watershed -- 3.6 Segmentation Evaluation Metric -- 4 Results -- 4.1 Results from Original Pipelines -- 4.2 Results from Fusion Algorithm 1 -- 4.3 Results from Fusion Algorithm 2 -- 4.4 Results from Fusion Algorithm 3 -- 5 Discussions -- 6 Data and Code Availability -- References -- Exploring Xylella fastidiosa's Metabolic Traits Using a GSM Model of the Phytopathogenic Bacterium -- 1 Introduction -- 2 Materials and Methods -- 2.1 Software -- 2.2 Metabolic Model Reconstruction -- 2.3 Identification of Potential Drug Targets -- 3 Results and Discussion -- 3.1 Model Validation -- 3.2 Drug Targeting -- 4 Conclusion -- 5 Supplementary Materials -- References. Genomic Regions with Atypical Concentration of Inverted Repeats -- 1 Introduction -- 2 Methods -- 2.1 Distance Between Inverted Repeats -- 2.2 Measuring the Concentration of Inverted Repeats -- 2.3 Windows Selection -- 3 Results -- 4 Discussion and Conclusion -- References -- EvoPPI 2: A Web and Local Platform for the Comparison of Protein-Protein Interaction Data from Multiple Sources from the Same and Distinct Species -- 1 Introduction -- 2 Methods -- 2.1 Data -- 2.2 Web Interface Updates -- 2.3 Using EvoPPI Locally -- 3 Results and Discussion -- 4 Conclusion -- References -- Author Index. |
| Record Nr. | UNINA-9910627277503321 |
| Cham, Switzerland : , : Springer, , [2023] | ||
| Materiale a stampa | ||
| Lo trovi qui: Univ. Federico II | ||
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