{"text_format":"2","workbook":"xls","n_sheets":1,"sheets":["report2"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":1,"defined_names":1,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"report2","index":0,"n_rows":24,"n_cols":5,"rows_kept":24,"cut":false,"hidden":false,"merged":[[0,2,0,3],[0,4,0,5],[1,2,1,3],[1,4,1,5],[2,2,2,3],[4,2,4,3],[7,2,7,3],[8,2,8,3],[9,2,9,3],[10,2,10,3],[12,2,12,3],[13,2,13,3],[17,2,17,3]],"flags":["formulas_cached_only"]}
[null,"1.","Record Nr.",null,"UNINA9910135021603321"]
[null,null,"Titolo",null,"Computational methods for next generation sequencing data analysis / / edited by Ion Măndoiu, Alexander Zelikovsky"]
[null,null,"Pubbl/distr/stampa",null,"Hoboken, New Jersey : , : John Wiley & Sons, , [2016]"]
[{"$nulls":4},"©2016"]
[null,null,"ISBN",null,"1-119-27217-3"]
[{"$nulls":4},"1-119-27216-5"]
[{"$nulls":4},"1-119-27218-1"]
[null,null,"Descrizione fisica",null,"1 online resource (461 p.)"]
[null,null,"Collana",null,"Wiley series on bioinformatics : computational techniques and engineering"]
[null,null,"Disciplina",null,"611/.0181663"]
[null,null,"Soggetti",null,"Nucleotide sequence - Methodology"]
[{"$nulls":4},"Nucleotide sequence - Data processing"]
[null,null,"Lingua di pubblicazione",null,"Inglese"]
[null,null,"Formato",null,"Materiale a stampa"]
[null,null,null,"Livello bibliografico","Monografia"]
[null,null,null,"Note generali","Description based upon print version of record."]
[null,null,null,"Nota di bibliografia","Includes bibliographical references and index."]
[null,null,"Nota di contenuto",null,"Cover; Title Page; Copyright; Contents; Contributors; Preface; About the Companion Website; Part I Computing and Experimental Infrastructure for NGS; Chapter 1 Cloud Computing for Next-Generation Sequencing Data Analysis; 1.1 Introduction; 1.2 Challenges for NGS Data Analysis; 1.3 Background For Cloud Computing and its Programming Models; 1.4 Cloud Computing Services for NGS Data Analysis; 1.5 Conclusions and Future Directions; References; Chapter 2 Introduction to the Analysis of Environmental Sequence Information Using Metapathways; 2.1 Introduction & Overview; 2.2 Background"]
[{"$nulls":4},"2.3 Metapathways Processes2.4 Big Data Processing; 2.5 Downstream Analyses; 2.6 Conclusions; References; Chapter 3 Pooling Strategy for Massive Viral Sequencing; 3.1 Introduction; 3.2 Design of Pools for Big Viral Data; 3.3 Deconvolution of Viral Samples From Pools; 3.4 Performance of Pooling Methods on Simulated Data; 3.5 Experimental Validation of Pooling Strategy; 3.6 Conclusion; References; Chapter 4 Applications of High-Fidelity Sequencing Protocol to RNA Viruses; 4.1 Introduction; 4.2 High-Fidelity Sequencing Protocol; 4.3 Assembly of High-Fidelity Sequencing Data"]
[{"$nulls":4},"4.4 Performance of VGA on Simulated Data4.5 Performance of Existing Viral Assemblers on Simulated Consensus Error-Corrected Reads; 4.6 Performance of VGA on Real Hiv Data; 4.7 Comparison of Alignment on "]
[{"$nulls":4},"Error-Corrected Reads; 4.8 Evaluating of Error Correction Tools Based on High-Fidelity Sequencing Reads; Acknowledgment; References; Part II Genomics and Epigenomics; Chapter 5 Scaffolding Algorithms; 5.1 Scaffolding; 5.2 State-of-The-Art Scaffolding Tools; 5.3 Recent Scaffolding Tools; 5.4 Scaffolding Software Evaluation; References; Chapter 6 Genomic Variants Detection and Genotyping"]
[{"$nulls":4},"6.1 Introduction6.2 Methods for Detection and Genotyping OF SNPs and Small Indels; 6.3 Methods for Detection and Genotyping of CNVs; 6.4 Putting Everything Together; References; Chapter 7 Discovering and Genotyping Twilight Zone Deletions; 7.1 Introduction; 7.2 Notation; 7.3 Non-Twilight-Zone Deletion Discovery; 7.4 Discovering \"\"Twilight Zone\"\" Deletions: New Solutions; 7.5 Genotyping \"\"Twilight Zone\"\" Deletions; 7.6 Results; 7.7 Discussion; 7.8 Availability; Acknowledgments; References; Chapter 8 Computational Approaches for Finding Long Insertions and Deletions with NGS Data"]
[{"$nulls":4},"8.1 Background8.2 Methods; 8.3 Applications; 8.4 Conclusions and Future Directions; Acknowledgment; References; Chapter 9 Computational Approaches in Next-Generation Sequencing Data Analysis for Genome-Wide DNA Methylation Studies; 9.1 Introduction; 9.2 Enrichment-Based Approaches; 9.3 Bisulfite Treatment-Based Approaches; 9.4 Conclusion; References; Chapter 10 Bisulfite-Conversion-Based Methods for DNA Methylation Sequencing Data Analysis; 10.1 Introduction; 10.2 The Problem of Mapping BS-Treated Reads; 10.3 Algorithmic Approaches to the Problem Of Mapping BS-Treated Reads"]
[{"$nulls":4},"10.4 Methylation Estimation"]