LEADER 05412nam 2200673Ia 450 001 9910830159303321 005 20230828225220.0 010 $a1-280-74844-3 010 $a9786610748440 010 $a0-470-76250-0 010 $a0-470-98864-9 010 $a1-4051-7209-6 035 $a(CKB)1000000000341876 035 $a(EBL)284303 035 $a(OCoLC)437176176 035 $a(SSID)ssj0000130134 035 $a(PQKBManifestationID)11134192 035 $a(PQKBTitleCode)TC0000130134 035 $a(PQKBWorkID)10080750 035 $a(PQKB)10889991 035 $a(MiAaPQ)EBC284303 035 $a(EXLCZ)991000000000341876 100 $a20050721d2006 uy 0 101 0 $aeng 135 $aur|n|---||||| 181 $ctxt 182 $cc 183 $acr 200 00$aControl of primary metabolism in plants$b[electronic resource] /$fedited by William C. Plaxton and Michael T. McManus 210 $aAmes, Iowa $cBlackwell Pub.$dc2006 215 $a1 online resource (412 p.) 225 1 $aAnnual Plant Reviews 300 $aDescription based upon print version of record. 311 $a1-4051-3096-2 320 $aIncludes bibliographical references and index. 327 $aControl of Primary Metabolism in Plants; Contents; Contributors; Preface; 1 Evaluation of the transcriptome and genome to inform the study of metabolic control in plants; 1.1 Introduction; 1.2 Transcript profiling technologies; 1.3 Transcript profiling workflow; 1.3.1 Data generation; 1.3.2 Data management; 1.3.3 Data processing; 1.3.3.1 Raw data handling; 1.3.3.2 Normalisation; 1.3.4 Data analysis; 1.3.4.1 Differential expression; 1.3.4.2 Data mining; 1.3.4.3 Functional categorisation; 1.3.5 Data visualisation; 1.4 What can we learn from transcript profiles performed in a starchless mutant? 327 $a1.5 Conclusion/perspectivesAcknowledgements; References; 2 The use of proteomics in the study of metabolic control; 2.1 Introduction; 2.2 Proteomic methodologies; 2.2.1 Extraction of proteins from plant tissue; 2.2.2 Separation, display and quantification of proteins; 2.2.3 Identification of proteins by mass spectrometry; 2.2.4 Gel-free proteomic approaches; 2.3 Cataloging protein localization; 2.3.1 Localizing proteins to different tissues; 2.3.2 Establishing subcellular protein localization: methodologies; 2.3.3 Mitochondrial and chloroplast proteomes; 2.3.4 Other subcellular proteomes 327 $a2.3.5 A stamp of authenticity for the subcellular protein postcode?2.4 Quantitative analyses of the proteome; 2.4.1 Examples of quantitative proteomics; 2.4.2 The use of high-throughput measurements of enzyme activity as a proxy for quantitative proteomics; 2.5 The use of proteomics to investigate post-translational modification of proteins; 2.5.1 Systematic identification of phosphorylated proteins; 2.5.2 Systematic identification of protein redox modifications; 2.6 The use of proteomics to investigate protein-protein interactions; 2.7 Future perspectives; References 327 $a3 Study of metabolic control in plants by metabolomics3.1 Introduction; 3.1.1 What is metabolomics?; 3.1.2 Systemic properties in metabolic networks; 3.2 Metabolomic methods; 3.2.1 Historic perspective of plant metabolite analysis; 3.2.2 Modern instrumentation in metabolite analysis; 3.2.3 Sample preparation for metabolomics; 3.2.4 Metabolome coverage; 3.2.4.1 The quest for combining sensitivity and selectivity; 3.2.4.2 Cellular and subcellular metabolomics; 3.2.4.3 Compound identification; 3.2.5 Quality control; 3.3 Metabolomic databases 327 $a3.4 Pathways, clusters and networks: applications of plant metabolomics3.4.1 Bioengineering of metabolism; 3.4.2 Plant biochemistry; 3.4.2.1 Pathway analysis; 3.4.2.2 Flux measurements; 3.4.3 Physiological studies; 3.4.4 Plant metabolomic methods; 3.4.5 Food science; 3.5 Outlook; References; 4 Metabolite transporters in the control of plant primary metabolism; 4.1 Introduction; 4.2 Photoassimilation and assimilate transport in source cells; 4.2.1 Carbon assimilation by the reductive pentose-phosphate pathway (Calvin cycle); 4.2.2 The plastidic triose-phosphate pool - a metabolic crossway 327 $a4.2.2.1 Communication between the starch and sucrose biosynthetic pathways via TPT 330 $aThe ability to control the rates of metabolic processes in response to changes in the internal or external environment is an indispensable attribute of living cells that must have arisen with life's origin. This adaptability is necessary for conserving the stability of the intracellular environment which is, in turn, essential for maintaining an efficient functional state. The advent of genomics, proteomics, and metabolomics has revolutionised the study of plant development and is now having a significant impact on the study of plant metabolism and its control. In the last few years, significa 410 0$aAnnual Plant Reviews 606 $aPlants$xMetabolism 606 $aBotany 615 0$aPlants$xMetabolism. 615 0$aBotany. 676 $a572.42 676 $a572/.42 676 $a580.5 701 $aPlaxton$b William C$0977317 701 $aMcManus$b Michael T$0857008 801 0$bMiAaPQ 801 1$bMiAaPQ 801 2$bMiAaPQ 906 $aBOOK 912 $a9910830159303321 996 $aControl of primary metabolism in plants$92226362 997 $aUNINA