LEADER 05438nam 22007935 450 001 9910483251403321 005 20251226200551.0 010 $a3-540-68894-3 024 7 $a10.1007/978-3-540-68894-5 035 $a(CKB)1000000000440610 035 $a(SSID)ssj0000317714 035 $a(PQKBManifestationID)11245535 035 $a(PQKBTitleCode)TC0000317714 035 $a(PQKBWorkID)10294610 035 $a(PQKB)10486603 035 $a(DE-He213)978-3-540-68894-5 035 $a(MiAaPQ)EBC3068574 035 $a(PPN)127048294 035 $a(BIP)23624697 035 $a(EXLCZ)991000000000440610 100 $a20100301d2008 u| 0 101 0 $aeng 135 $aurnn#008mamaa 181 $ctxt 182 $cc 183 $acr 200 10$aFormal Methods for Computational Systems Biology $e8th International School on Formal Methods for the Design of Computer, Communication, and Software Systems, SFM 2008 Bertinoro, Italy, June 2-7, 2008 /$fedited by Marco Bernardo, Pierpaolo Degano, Gianluigi Zavattaro 205 $a1st ed. 2008. 210 1$aBerlin, Heidelberg :$cSpringer Berlin Heidelberg :$cImprint: Springer,$d2008. 215 $a1 online resource (X, 527 p.) 225 1 $aProgramming and Software Engineering,$x2945-9168 ;$v5016 300 $aLectures. 311 08$a3-540-68892-7 320 $aIncludes bibliographical references and index. 327 $aRegular Lectures -- Sensitivity Analysis of Stochastic Models of Bistable Biochemical Reactions -- Pathway Logic -- Formal Cell Biology in Biocham -- Hierarchical Modeling for Computational Biology -- Simulation Methods in Systems Biology -- Membrane Computing as a Modeling Framework. Cellular Systems Case Studies -- Petri Nets for Systems and Synthetic Biology -- Process Algebras in Systems Biology -- The BlenX Language: A Tutorial -- BISCA Talks -- Cells in Silico: A Holistic Approach -- The Calculus of Looping Sequences -- Hybrid Systems and Biology -- ?@: A ?-Based Process Calculus for the Implementation of Compartmentalised Bio-inspired Calculi -- A Gentle Introduction to Stochastic (Poly)Automata Collectives and the (Bio)Chemical Ground Form. 330 $aThis volume presents the set of papers accompanying the lectures of the eighth International School on Formal Methods for the Design of Computer, Com- nication, and Software Systems (SFM). Thisseriesofschoolsaddressestheuseofformalmethodsincomputerscience asaprominentapproachtotherigorousdesignofcomputer, communication, and software systems. The main aim of the SFM series is to o'er a good spectrum of current research in foundations as well as applications of formal methods, which can be of help for graduate students and young researchers who intend to approach the ?eld. SFM 2008 was devoted to formal techniques for computational systems - ology and covered several aspects of the ?eld, including computational models, calculi and logics for biological systems, and veri'cation and simulation me- ods. Theschoolfeatured not onlyregularlectures, but also talksgivenby people involvedinthe ItalianresearchprojectonBio-InspiredSystems andCalculiwith Applications (BISCA). The ?rst partof this volume comprises nine papers basedon regularlectures. The paper by Degasperi and Gilmore describes the application of sensitivity analysistechniques to stochastic simulation algorithms. Talcott's paper presents pathway logic, an approach to modeling and analysis of biological processes based on rewriting logic. Fages and Soliman study reaction graphs and acti- tion/inhibition graphs used by biologists through formal methods originating from programming theory. The paper by Maus, John, R] ohl, and Uhrmacher d- cusses categories, abstraction hierarchies, and composition hierarchies playing a role in modeling and simulation for computational biology. Gillespie's paper - views the theory of stochastic chemical kinetics and several simulation methods that are based on that theory. 410 0$aProgramming and Software Engineering,$x2945-9168 ;$v5016 606 $aSoftware engineering 606 $aCompilers (Computer programs) 606 $aComputer science 606 $aComputers, Special purpose 606 $aComputer networks 606 $aSoftware Engineering 606 $aCompilers and Interpreters 606 $aComputer Science Logic and Foundations of Programming 606 $aSpecial Purpose and Application-Based Systems 606 $aComputer Communication Networks 615 0$aSoftware engineering. 615 0$aCompilers (Computer programs). 615 0$aComputer science. 615 0$aComputers, Special purpose. 615 0$aComputer networks. 615 14$aSoftware Engineering. 615 24$aCompilers and Interpreters. 615 24$aComputer Science Logic and Foundations of Programming. 615 24$aSpecial Purpose and Application-Based Systems. 615 24$aComputer Communication Networks. 676 $a005.1 701 $aBernardo$b Marco$01754236 701 $aDegano$b Pierpaolo$f1950-$01750376 701 $aZavattaro$b Gianluigi$01754873 712 12$aInternational School on Formal Methods for the Design of Computer, Communication, and Software Systems. 801 0$bMiAaPQ 801 1$bMiAaPQ 801 2$bMiAaPQ 906 $aBOOK 912 $a9910483251403321 996 $aFormal methods for computational systems biology$94193279 997 $aUNINA