1.

Record Nr.

UNISA996466185403316

Titolo

Algorithms for Computational Biology [[electronic resource] ] : 6th International Conference, AlCoB 2019, Berkeley, CA, USA, May 28–30, 2019, Proceedings / / edited by Ian Holmes, Carlos Martín-Vide, Miguel A. Vega-Rodríguez

Pubbl/distr/stampa

Cham : , : Springer International Publishing : , : Imprint : Springer, , 2019

ISBN

3-030-18174-X

Edizione

[1st ed. 2019.]

Descrizione fisica

1 online resource (XVI, 225 p. 66 illus., 35 illus. in color.)

Collana

Lecture Notes in Bioinformatics ; ; 11488

Disciplina

570.285

Soggetti

Bioinformatics

Arithmetic and logic units, Computer

Algorithms

Artificial intelligence

Numerical analysis

Computer science—Mathematics

Computational Biology/Bioinformatics

Arithmetic and Logic Structures

Algorithm Analysis and Problem Complexity

Artificial Intelligence

Numeric Computing

Discrete Mathematics in Computer Science

Lingua di pubblicazione

Inglese

Formato

Materiale a stampa

Livello bibliografico

Monografia

Nota di bibliografia

Includes bibliographical references and index.

Nota di contenuto

Invited Talk -- New Divide-and-Conquer Techniques for Large-Scale Phylogenetic Estimation -- Biological Networks and Graph Algorithms -- New Polynomial-Time Algorithm around the Scaffolding Problem -- Enumerating Dominant Pathways in Biological Networks by Information Flow Analysis -- Comparing Different Graphlet Measures for Evaluating Network Model Fits to BioGRID PPI Networks -- Graph-Theoretic Partitioning of RNAs and Classification of Pseudoknots -- PathRacer: Racing Profile HMM Paths on Assembly Graph -- Genome



Rearrangement, Assembly and Classification -- A Uniform Theory of Adequate Subgraphs for the Genome Median, Halving, and Aliquoting Problems -- Lightweight Metagenomic Classification via eBWT -- MULKSG: MULtiple K Simultaneous Graph Assembly -- Counting Sorting Scenarios and Intermediate Genomes for the Rank Distance -- Generalizations of the Genomic Rank Distance to Indels -- Sequence Analysis, Phylogenetics and Other Biological Processes -- Using INC within Divide-and-Conquer Phylogeny Estimation -- Predicting Methylation from Sequence and Gene Expression Using Deep Learning with Attention -- A Mathematical Model for Enhancer Activation Kinetics During Cell Differentiation -- Transcript Abundance Estimation and the Laminar Packing Problem -- Efficient Algorithms for Finding Edit-Distance Based Motifs.

Sommario/riassunto

This book constitutes the proceedings of the 6th InternationalConference on Algorithms for Computational Biology, AlCoB 2019, held in Berkeley, CA, USA, in May 2019. The 15 full papers presented together with 1 invited paper were carefully reviewed and selected from 30 submissions. They are organized in the following topical sections: Biological networks and graph algorithms; genome rearrangement, assembly and classification; sequence analysis, phylogenetics and other biological processes.