1.

Record Nr.

UNISA996466146103316

Titolo

Systems biology and regulatory genomics : Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA, December 2-4, 2005 : revised selected papers / / edited by Eleazar Eskin [and three others]

Pubbl/distr/stampa

Berlin, Germany ; ; New York, New York : , : Springer, , [2007]

©2007

ISBN

1-280-90212-4

9786610902125

3-540-48540-6

Edizione

[1st ed. 2006.]

Descrizione fisica

1 online resource (X, 261 p.)

Collana

Lecture Notes in Bioinformatics ; ; 4023

Disciplina

572.865

Soggetti

Genetic regulation - Data processing

Bioinformatics

Systems biology

Lingua di pubblicazione

Inglese

Formato

Materiale a stampa

Livello bibliografico

Monografia

Note generali

Includes index.

Nota di bibliografia

Includes bibliographical references and index.

Nota di contenuto

An Interactive Map of Regulatory Networks of Pseudomonas aeruginosa Genome -- The Pathalyzer: A Tool for Analysis of Signal Transduction Pathways -- Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations -- Comparison of Protein-Protein Interaction Confidence Assignment Schemes -- Characterization of the Effects of TF Binding Site Variations on Gene Expression Towards Predicting the Functional Outcomes of Regulatory SNPs -- Comparative Systems Biology of the Sporulation Initiation Network in Prokaryotes -- Improvement of Computing Times in Boolean Networks Using Chi-square Tests -- Build a Dictionary, Learn a Grammar, Decipher Stegoscripts, and Discover Genomic Regulatory Elements -- Causal Inference of Regulator-Target Pairs by Gene Mapping of Expression Phenotypes -- Examination of the tRNA Adaptation Index as a Predictor of Protein Expression Levels -- Improved Duplication Models for Proteome Network Evolution -- Application of Expectation Maximization Clustering to Transcription



Factor Binding Positions for cDNA Microarray Analysis -- Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data -- Topological Robustness of the Protein-Protein Interaction Networks -- A Bayesian Approach for Integrating Transcription Regulation and Gene Expression: Application to Saccharomyces Cerevisiae Cell Cycle Data -- Probabilistic in Silico Prediction of Protein-Peptide Interactions -- Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences -- Annotation of Promoter Regions in Microbial Genomes Based on DNA Structural and Sequence Properties -- An Interaction-Dependent Model for Transcription Factor Binding -- Computational Characterization and Identification of Core Promoters of MicroRNA Genes in C. elegans, H. sapiens and A. thaliana -- A Comprehensive Kinetic Model of the Exocytotic Process: Evaluation of the Reaction Mechanism.