The Moso bamboo genome / / edited by Jian Gao

• Record Nr.: UNINA9910512173903321
• Pubbl/distr/stampa: Cham, Switzerland : , : Springer, , [2022]; ©2022
• ISBN: 9783030808365; 9783030808358
• Descrizione fisica: 1 online resource (220 pages)
• Collana: Compendium of Plant Genomes
• Disciplina: 584.922
• Soggetti: Agriculture; Biotechnology; Bambú; Genètica molecular vegetal; Llibres electrònics
• Lingua di pubblicazione: Inglese
• Formato: Materiale a stampa
• Livello bibliografico: Monografia
• Nota di bibliografia: Includes bibliographical references and index.
• Nota di contenuto: Intro -- Preface to the Series -- Preface -- Acknowledgements -- Contents -- Contributors -- Abbreviations -- 1 Economic Value and Research Significance of Moso Bamboo -- Abstract -- 1.1 Distribution of Moso Bamboo -- 1.1.1 Global Distribution of Moso Bamboo -- 1.1.2 Distribution in China -- 1.1.3 Quality of Moso Bamboo Forests -- 1.1.4 Biomass and Carbon Stock of Moso Bamboo Forests -- 1.1.5 Resource Distribution and Changes -- 1.2 Uses and Economic Value -- 1.2.1 Uses -- 1.2.1.1 Used as an Alternative to Timber -- 1.2.1.2 Used as Food -- 1.2.1.3 Medicinal Uses -- 1.2.1.4 Ornamental Uses -- 1.2.1.5 Used in Papermaking -- 1.2.1.6 Used as Fodder -- 1.2.1.7 Used for Soil Conservation and Wind Blocking -- 1.2.1.8 Other Uses -- 1.2.2 Economic Value -- 1.3 Status of Moso Bamboo Research -- 1.3.1 Ecological Management of Moso Bamboo Forests -- 1.3.1.1 Studies on Management Model of Moso Bamboo Forest -- 1.3.1.2 Management Model of Moso Bamboo Mixed Forests -- 1.3.2 Study on Moso Bamboo Materials Properties -- 1.3.2.1 Study on Moso bamboo's Properties -- 1.3.3 Processing and Utilization of Moso Bamboo Materials -- 1.3.3.1 Bamboo-Based Panels -- 1.3.3.2 Bamboo Charcoal -- 1.3.3.3 Bamboo ; Vinegar -- 1.3.3.4 Bamboo Fibre -- 1.3.4 Moso Bamboo Genome -- References -- 2 Intraspecific Variation of Moso Bamboo -- Abstract -- 2.1 Introduction -- 2.2 Intraspecific Variation of Moso Bamboo -- 2.2.1 Phyllostachys edulis f. edulis -- 2.2.2 Phyllostachys edulis f. abbreviata -- 2.2.3 Phyllostachys edulis f. anjiensis -- 2.2.4 Phyllostachys edulis f. aureovariegata -- 2.2.5 Phyllostachys edulis f. bicolor -- 2.2.6 Phyllostachys edulis f. curviculmis -- 2.2.7 Phyllostachys edulis f. epruinosa -- 2.2.8 Phyllostachys edulis f. exaurita -- 2.2.9 Phyllostachys edulis f. gracilis -- 2.2.10 Phyllostachys edulis f. heterocycla -- 2.2.11 Phyllostachys edulis f. holochrysa.; 2.2.12 Phyllostachys edulis f. huamozhu -- 2.2.13 Phyllostachys edulis f. luteosulcata -- 2.2.14 Phyllostachys edulis f. mira -- 2.2.15 Phyllostachys edulis f. nabeshimana -- 2.2.16 Phyllostachys edulis f. obliquinoda -- 2.2.17 Phyllostachys edulis f. obtusangula -- 2.2.18 Phyllostachys edulis f. pachyloen -- 2.2.19 Phyllostachys edulis f. porphyrosticta -- 2.2.20 Phyllostachys edulis f. purpureoculmis -- 2.2.21 Phyllostachys edulis f. purpureosulcata -- 2.2.22 Phyllostachys edulis f. quadrangulata -- 2.2.23 Phyllostachys edulis f. tubaeformis -- 2.2.24 Phyllostachys edulis f. tumescens -- 2.2.25 Phyllostachys edulis f. ventricosa -- 2.2.26 Phyllostachys edulis f. venusta -- 2.2.27 Phyllostachys edulis 'Anderson' -- 2.2.28 Phyllostachys edulis 'Bicanna' -- 2.2.29 Phyllostachys edulis 'Jinsilonglinzhu' -- 2.2.30 Phyllostachys edulis 'Moonbeam' -- 2.2.31 Phyllostachys Edulis 'Oboro' -- 2.2.32 Phyllostachys edulis 'Okina' -- References -- 3 Biological Traits of Moso Bamboo -- Abstract -- 3.1 Introduction -- 3.2 Rhizome Characteristics of Moso Bamboo -- 3.3 Shoot Growth Characteristics -- 3.3.1 Daily Growth of Moso Bamboo Shoot -- 3.3.2 Dynamic Anatomical Variation in Shoot Tip Growth Stages -- 3.4 Culm Growth Characteristics -- 3.5 Characteristics of Leaves -- 3.6 Characteristics of Flowers -- 3.7 Characteristics of Moso Bamboo Seeds -- 3.8 Bamboo Maturation and Growth Characteristics of Bamboo Stands -- References -- 4 Moso Bamboo Genome -- Abstract -- 4.1 Introduction -- 4.2 Moso Bamboo Genome Size -- 4.3 Moso Bamboo Draft Genome -- 4.4 The Genome Database of Bamboos -- 4.5 The Draft Genome of Other Bamboos -- 4.6 The Genome Polyploidy of Woody Bamboos -- 4.7 The Genome Clue to the Unique Biological Traits of Bamboos -- References -- 5 Moso Bamboo Transposon -- Abstract -- 5.1 Introduction.; 5.2 Long Terminal Repeat Retroelements (LTR Retroelements) from Moso Bamboo -- 5.3 MITEs from Moso Bamboo -- 5.4 Transposable Mariner-Like Elements (MLE) in Moso Bamboo -- 5.5 Transposable Elements and Moso Bamboo Flowering -- 5.6 Transposable Elements and Moso Bamboo Variants -- References -- 6 Transcriptome of Moso Bamboo -- Abstract -- 6.1 Global Transcriptome Analysis in the Growth of Moso Bamboo Shoots -- 6.1.1 Introduction -- 6.1.2 Overview of Gene Expression in Each Shoot Growth Stage -- 6.1.3 Functional Analysis on DGEs -- 6.1.4 Importance of Cell Division and Elongation to Shoot Elongation -- 6.1.5 Spatio-Temporal Dynamic Changes in Moso Bamboo Shoots -- 6.1.6 Conclusion -- 6.2 Global Transcriptome Analysis in Moso Bamboo Flower Development -- 6.2.1 Quality Control and Filtering of Sequence Data -- 6.2.2 Reads Mapped to the Reference Genome Dataset -- 6.2.3 Putative Moso Bamboo Floral Development Transcription Factors -- 6.2.4 Detection of Putative Genes Associated with Flowering Time Control and Flower Development -- 6.2.5 Change of Gene Expression Profile in Varying Flower Developmental Stages -- 6.2.6 Expression Level of Putative Genes During Flower Development -- 6.2.7 Gene Validation and Expression Analysis -- 6.2.8 Conclusions -- 6.3 Global Transcriptome Analysis in Germinating Moso Bamboo Seeds -- 6.3.1 Global Transcriptome ; Analysis -- 6.3.2 Germination Respiration Pathway -- References -- 7 Alternative Splicing and Alternative Polyadenylation in Moso Bamboo -- Abstract -- 7.1 Introduction -- 7.1.1 AS and APA in Plant -- 7.1.2 The Tissue-Specific AS and APA Pattern in Moso Bamboo -- 7.2 The Database of AS and APA in Moso Bamboo -- 7.3 Methods for Identification of AS and APA -- 7.3.1 Experiment and Sequencing -- 7.3.2 Bioinformatics Analysis -- 7.4 The Potential Functions of AS and APA.; 7.4.1 Alteration in Protein Domain by AS and APA -- 7.4.2 Nonsense-Mediated mRNA Decay (NMD) Regulation by AS and APA -- 7.4.3 Alteration of miRNA Target Sites by AS and APA -- 7.4.4 Diverse Back-Splicing Landscape: Insights into Circular RNAs in Moso Bamboo -- 7.5 Future Prospects -- References -- 8 Characterizations and Functions of Transcription Factor Gene Families -- Abstract -- 8.1 Resistance Gene Candidates -- 8.1.1 MYB Transcription Factor -- 8.1.2 BHLH Transcription Factors -- 8.1.3 bZIP Transcription Factors -- 8.1.4 GRF Transcription Factor -- 8.1.5 HD-Zip Transcription Factors -- 8.1.6 PHD Transcription Factors -- 8.1.7 SPL Transcription Factors -- 8.1.8 TCP Transcription Factors -- 8.1.9 Trihelix Transcription Factors -- 8.1.10 WRKY Family of Transcription Factors (TFs) -- 8.2 Flowering and Stamen Development Gene Candidates -- 8.2.1 Dof Transcription Factor -- 8.2.2 MADS Transcription Factor -- 8.2.3 CONSTANS-Like Gene Family -- 8.3 Endogenous Hormones Regulation in Shoot Fast Growth -- 8.3.1 SAUR Family Members -- 8.3.2 WUSCHEL-Related Homeobox (WOX) Protein Family -- 8.4 Ageing -- 8.4.1 NAC Transcription Factor -- References -- 9 MicroRNAs of Moso Bamboo -- Abstract -- 9.1 Introduction -- 9.2 miRNAs Could Regulate Reproductive Growth of Moso Bamboo -- 9.3 miRNAs Could Regulate Vegetative Growth of Moso Bamboo -- 9.4 Functions of Moso Bamboo miRNAs in Abiotic Stress Responses -- References -- 10 Mitochondrial Genome of Bambusicolous Fungus- Shiraia bambusicola -- Abstract -- 10.1 Introduction -- 10.2 Mitogenome Summary -- 10.2.1 General Description of Dothideomycetes -- 10.2.1.1 Fast Development of Mitogenomes -- 10.3 Definition of S. bambusicola and Its Distribution -- 10.3.1 Variational Definition of S. bambusicola -- 10.3.2 Expansive Distribution of S. bambusicola -- 10.4 Fascinating Properties of S. bambusicola.; 10.4.1 Exceptional Bambusicolous Fungus and Its Special Host -- 10.4.2 Amazing Function of Natural Products -- 10.5 Mitogenome Structure of S. bambusicola -- 10.5.1 Small Mitogenome Size -- 10.5.2 Explicit Sequence Structure -- 10.6 Interesting Genes from Mitogenome -- 10.6.1 Special Gene Order -- 10.6.2 Introns and the ORFs in Introns -- 10.6.3 Unknown ORFs and Conserved ORFs Within Intergenic Regions -- 10.6.4 Additional Obvious Characteristics -- 10.7 Evolutionary Status of S. bambusicola -- 10.8 Conclusions and Future Prospects -- References -- 11 Breeding Status and Strategies of Moso Bamboo -- Abstract -- 11.1 Main Propagation Methods and Techniques of Moso Bamboo -- 11.1.1 Transplanting of Mother Bamboo -- 11.1.2 Seedling of Moso Bamboo -- 11.1.3 Propagation by Burying Rhizomes -- 11.2 Main Breeding Methods and Techniques of Moso Bamboo -- 11.2.1 Hybrid Breeding Technology -- 11.2.2 Radiation Mutation Breeding -- 11.2.3 Molecular Marker Assisted Breeding -- 11.3 Molecular Breeding -- 11.3.1 Tissue Culture of Sympodial Bamboo Species -- 11.3.2 Moso Bamboo Tissue Culture -- 11.3.3 Genetic Transformation -- 11.4 Gene Editing -- 11.5 Prospect of Future of Moso Bamboo Breeding -- 11.5.1 Main Problems in Moso Bamboo Breeding -- 11.5.2 Proposal of Moso Bamboo Breeding -- 11.5.3 The Main Goal and Direction of Breeding Research -- ; References.