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Record Nr. |
UNINA9910464759903321 |
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Titolo |
Microarrays : current technology, innovations and applications / / edited by Zhili He, Department of Microbiology and Plant Biology, Institute for Environmental Genomics, University of Oklahoma, Norman, OK, USA |
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Pubbl/distr/stampa |
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Norfolk, England : , : Caister Academic Press, , [2014] |
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©2014 |
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ISBN |
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Descrizione fisica |
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1 online resource (258 p.) |
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Disciplina |
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Soggetti |
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DNA microarrays |
Electronic books. |
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Lingua di pubblicazione |
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Formato |
Materiale a stampa |
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Livello bibliografico |
Monografia |
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Note generali |
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Description based upon print version of record. |
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Nota di bibliografia |
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Includes bibliographical references and index. |
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Nota di contenuto |
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Contents ; Contents ; Contributors; Contributors; Preface; Preface; 1: Microarrays for Microbial Community Analysis at a Glance; Introduction; 1: Microarrays for Microbial Community Analysis at a Glance; Introduction; Microarrays for microbial community analysis at a glance; Microarrays for microbial community analysis at a glance; Key issues for microarray analysis; Key issues for microarray analysis; Applications of microarrays for profiling microbial communities; Applications of microarrays for profiling microbial communities |
Advantages and limitations of microarrays for microbial community analysisAdvantages and limitations of microarrays for microbial community analysis; Conclusions and future directions; Conclusions and future directions; 2: Software Tools for the Selection of Oligonucleotide Probes for Microarrays; Introduction; 2: Software Tools for the Selection of Oligonucleotide Probes for Microarrays; Introduction; General criteria for probe design; General criteria for probe design; Probe design algorithms for microbial DNA microarrays; Probe design algorithms for microbial DNA microarrays |
Discussion/challenges and future trendsDiscussion/challenges and future trends; Conclusions; Online resources for oligonucleotide probe design programs and databases; Conclusions; Online resources for |
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oligonucleotide probe design programs and databases; 3: Development and Evaluation of Functional Gene Arrays with GeoChip as an Example; Introduction; 3: Development and Evaluation of Functional Gene Arrays with GeoChip as an Example; Introduction; FGA development; FGA development; FGA construction and experimental evaluation; FGA construction and experimental evaluation |
Core functional gene families covered by GeoChipsCore functional gene families covered by GeoChips; Challenges and future directions; Challenges and future directions; 4: Microarray Data Analysis; Introduction; Microarray image process; 4: Microarray Data Analysis; Introduction; Microarray image process; Microarray data preprocessing; Microarray data preprocessing; Statistical analysis; Statistical analysis; Conclusions/challenges and future trends; Conclusions/challenges and future trends; 5: Microarray of 16S rRNA Gene Probes for Quantifying Population Differences Across Microbiome Samples |
IntroductionMicroarray of 16S rRNA Gene Probes for Quantifying Population Differences Across Microbiome Samples; Introduction; PhyloChip G3 data analysis; PhyloChip G3 data analysis; Discussion and future trends; Discussion and future trends; Conclusions; Conclusions; 6: GeoChip Applications in Bioremediation Studies; Introduction; Functional gene arrays for bioremediation studies; 6: GeoChip Applications in Bioremediation Studies; Introduction; Functional gene arrays for bioremediation studies; GeoChip design; GeoChip design; Application of GeoChip to bioremediation studies |
Application of GeoChip to bioremediation studies |
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Sommario/riassunto |
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Microorganisms are the most diverse group of organisms and play important and distinctive roles in their ecosystems. They interact with their peers and other organisms (e.g., plants, animals) to form a complicated food web, significantly impacting ecosystem functions and services. However, understanding the diversity, composition, structure, function, activity, and dynamics of microbial communities remains challenging. Over the past decade, microarray-based technologies have been developed to address such challenges. This book is focused on current microarray technologies and their application |
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