1.

Record Nr.

UNINA9910300110903321

Autore

Xia Yinglin

Titolo

Statistical Analysis of Microbiome Data with R / / by Yinglin Xia, Jun Sun, Ding-Geng Chen

Pubbl/distr/stampa

Singapore : , : Springer Nature Singapore : , : Imprint : Springer, , 2018

ISBN

981-13-1534-5

Edizione

[1st ed. 2018.]

Descrizione fisica

1 online resource (518 pages)

Collana

ICSA Book Series in Statistics, , 2199-0999

Disciplina

579.16

Soggetti

Mathematical statistics - Data processing

Biometry

Big data

Statistics and Computing

Biostatistics

Big Data

Lingua di pubblicazione

Inglese

Formato

Materiale a stampa

Livello bibliografico

Monografia

Nota di contenuto

Chapter 1: Introduction to R, RStudio and ggplot2 -- Chapter 2: What are Microbiome Data? -- Chapter 3: Bioinformatic and Statistical Analyses of Microbiome Data -- Chapter 4: Power and Sample Size Calculation in Hypothesis Testing Microbiome Data -- Chapter 5: Microbiome Data Management -- Chapter 6: Exploratory Analysis of Microbiome Data -- Chapter 7: Comparisons of Diversities, OTUs and Taxa among Groups -- Chapter 8: Community Composition Study -- Chapter 9: Modeling Over-dispersed Microbiome Data -- Chapter 10: Linear Regression Modeling metadata -- Chapter 11: Modeling Zero-Inflated Microbiome Data.

Sommario/riassunto

This unique book addresses the statistical modelling and analysis of microbiome data using cutting-edge R software. It includes real-world data from the authors’ research and from the public domain, and discusses the implementation of R for data analysis step by step. The data and R computer programs are publicly available, allowing readers to replicate the model development and data analysis presented in each chapter, so that these new methods can be readily applied in their own research. The book also discusses recent developments in statistical



modelling and data analysis in microbiome research, as well as the latest advances in next-generation sequencing and big data in methodological development and applications. This timely book will greatly benefit all readers involved in microbiome, ecology and microarray data analyses, as well as other fields of research.